Magnesium in PDB 5egc: Structure of the Adeno-Associated Virus Serotype 1 Sialic Acid Complex

The structure of Structure of the Adeno-Associated Virus Serotype 1 Sialic Acid Complex, PDB code: 5egc was solved by L.Y.Huang, M.Agbandje-Mckenna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.92 / 3.01
Space group	C 1 2 1 2
Cell size a, b, c (Å), α, β, γ (°)	455.627, 261.749, 450.980, 90.00, 111.06, 90.00
R / Rfree (%)	26.9 / 27.6

The binding sites of Magnesium atom in the Structure of the Adeno-Associated Virus Serotype 1 Sialic Acid Complex (pdb code 5egc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Adeno-Associated Virus Serotype 1 Sialic Acid Complex, PDB code: 5egc:

Magnesium binding site 1 out of 1 in the Structure of the Adeno-Associated Virus Serotype 1 Sialic Acid Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Adeno-Associated Virus Serotype 1 Sialic Acid Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg802 b:28.1 occ:1.00 OD2 A:ASP231 3.6 28.3 1.0 OG1 A:THR233 4.1 19.5 1.0 OD1 A:ASP231 4.1 27.3 1.0 CG A:ASP231 4.3 24.4 1.0 O A:SER232 4.6 24.6 1.0

L.Y.Huang, A.Patel, R.Ng, E.B.Miller, S.Halder, R.Mckenna, A.Asokan, M.Agbandje-Mckenna. Characterization of the Adeno-Associated Virus 1 and 6 Sialic Acid Binding Site. J.Virol. V. 90 5219 2016.
ISSN: ESSN 1098-5514
PubMed: 26962225
DOI: 10.1128/JVI.00161-16