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Magnesium in PDB 5exe: Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct
Enzymatic activity of Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct
All present enzymatic activity of Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct:
1.2.7.10;
1.2.7.10;
Protein crystallography data
The structure of Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct, PDB code: 5exe
was solved by
M.I.Gibson,
P.Y.-T.Chen,
C.L.Drennan,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 48.70 / 1.88 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 113.653, 144.131, 161.715, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 18.1 / 21.3 |
Other elements in 5exe:
The structure of Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct also contains other interesting chemical elements:
| Iron | (Fe) | 24 atoms |
| Sodium | (Na) | 1 atom |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct
(pdb code 5exe). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct, PDB code: 5exe:
Jump to Magnesium binding site number: 1; 2; 3;
In total 3 binding sites of Magnesium where determined in the Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct, PDB code: 5exe:
Jump to Magnesium binding site number: 1; 2; 3;
Magnesium binding site 1 out of 3 in 5exe
Go back to
Magnesium Binding Sites List in 5exe
Magnesium binding site 1 out
of 3 in the Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct within 5.0Å range:
|
Magnesium binding site 2 out of 3 in 5exe
Go back to
Magnesium Binding Sites List in 5exe
Magnesium binding site 2 out
of 3 in the Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct within 5.0Å range:
|
Magnesium binding site 3 out of 3 in 5exe
Go back to
Magnesium Binding Sites List in 5exe
Magnesium binding site 3 out
of 3 in the Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct within 5.0Å range:
|
Reference:
M.I.Gibson,
P.Y.Chen,
A.C.Johnson,
E.Pierce,
M.Can,
S.W.Ragsdale,
C.L.Drennan.
One-Carbon Chemistry of Oxalate Oxidoreductase Captured By X-Ray Crystallography. Proc.Natl.Acad.Sci.Usa V. 113 320 2016.
ISSN: ESSN 1091-6490
PubMed: 26712008
DOI: 10.1073/PNAS.1518537113
Page generated: Sun Sep 29 04:00:13 2024
ISSN: ESSN 1091-6490
PubMed: 26712008
DOI: 10.1073/PNAS.1518537113
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