Magnesium in PDB 5fad: Sah Complex with Akmt From the Hyperthermophilic Archaeon Sulfolobus Islandicus

The structure of Sah Complex with Akmt From the Hyperthermophilic Archaeon Sulfolobus Islandicus, PDB code: 5fad was solved by S.Ouyang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.90 / 1.87
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	38.162, 51.755, 40.596, 90.00, 117.84, 90.00
R / Rfree (%)	18.4 / 21.7

The binding sites of Magnesium atom in the Sah Complex with Akmt From the Hyperthermophilic Archaeon Sulfolobus Islandicus (pdb code 5fad). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Sah Complex with Akmt From the Hyperthermophilic Archaeon Sulfolobus Islandicus, PDB code: 5fad:

Magnesium binding site 1 out of 1 in the Sah Complex with Akmt From the Hyperthermophilic Archaeon Sulfolobus Islandicus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Sah Complex with Akmt From the Hyperthermophilic Archaeon Sulfolobus Islandicus within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg202 b:28.6 occ:1.00 OE2 A:GLU129 1.8 57.4 1.0 O A:HOH339 2.1 34.5 1.0 O A:HOH401 2.1 34.5 1.0 ND1 A:HIS150 2.1 37.5 1.0 NE2 A:HIS128 2.4 32.8 1.0 CE1 A:HIS150 2.9 39.5 1.0 CD A:GLU129 3.0 47.9 1.0 CE1 A:HIS128 3.2 30.8 1.0 CG A:HIS150 3.2 36.2 1.0 CD2 A:HIS128 3.4 33.0 1.0 CB A:HIS150 3.8 34.0 1.0 CG A:GLU129 3.8 49.9 1.0 OE1 A:GLU129 3.9 59.8 1.0 NE2 A:HIS150 4.0 34.3 1.0 CD2 A:HIS150 4.2 37.9 1.0 ND1 A:HIS128 4.3 32.5 1.0 CA A:HIS150 4.3 34.6 1.0 O A:HOH383 4.4 34.5 1.0 CB A:GLU129 4.4 35.9 1.0 CG A:HIS128 4.5 32.1 1.0 O A:HOH334 4.5 34.5 1.0 CZ A:PHE102 4.6 27.1 1.0 O A:ASN149 4.7 41.3 1.0 CE1 A:PHE102 4.9 25.6 1.0

Y.Chu, Y.Zhu, Y.Chen, W.Li, Z.Zhang, D.Liu, T.Wang, J.Ma, H.Deng, Z.J.Liu, S.Ouyang, L.Huang. Akmt Catalyzes Extensive Protein Lysine Methylation in the Hyperthermophilic Archaeon Sulfolobus Islandicus But Is Dispensable For the Growth of the Organism Mol.Cell Proteomics V. 15 2908 2016.
ISSN: ESSN 1535-9484
PubMed: 27329856
DOI: 10.1074/MCP.M115.057778