Magnesium in PDB 5fr2: Farnesylated Rhoa-Gdp in Complex with Rhogdi-Alpha, Lysine Acetylated at K178

The structure of Farnesylated Rhoa-Gdp in Complex with Rhogdi-Alpha, Lysine Acetylated at K178, PDB code: 5fr2 was solved by N.Kuhlmann, S.Wroblowski, P.Knyphausen, S.De Boor, J.Brenig, A.Y.Zienert, K.Meyer-Teschendorf, G.J.K.Praefcke, H.Nolte, M.Krueger, M.Schacherl, U.Baumann, L.C.James, J.W.Chin, M.Lammers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.245 / 3.35
Space group	P 62
Cell size a, b, c (Å), α, β, γ (°)	176.979, 176.979, 63.896, 90.00, 90.00, 120.00
R / Rfree (%)	23.62 / 25.77

The binding sites of Magnesium atom in the Farnesylated Rhoa-Gdp in Complex with Rhogdi-Alpha, Lysine Acetylated at K178 (pdb code 5fr2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Farnesylated Rhoa-Gdp in Complex with Rhogdi-Alpha, Lysine Acetylated at K178, PDB code: 5fr2:

Magnesium binding site 1 out of 1 in the Farnesylated Rhoa-Gdp in Complex with Rhogdi-Alpha, Lysine Acetylated at K178


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Farnesylated Rhoa-Gdp in Complex with Rhogdi-Alpha, Lysine Acetylated at K178 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1193 b:27.9 occ:1.00 O A:HOH2004 2.1 62.0 1.0 O A:THR37 2.1 47.2 1.0 O3B A:GDP1192 2.1 47.9 1.0 OG1 A:THR19 2.2 42.4 1.0 O2B A:GDP1192 3.1 49.7 1.0 C A:THR37 3.1 45.5 1.0 PB A:GDP1192 3.1 45.0 1.0 O1A A:GDP1192 3.2 46.0 1.0 CB A:THR19 3.3 44.1 1.0 CA A:THR37 3.6 43.4 1.0 O A:PRO36 3.6 38.8 1.0 O3A A:GDP1192 4.0 46.0 1.0 PA A:GDP1192 4.2 43.4 1.0 CG2 A:THR19 4.2 45.3 1.0 N A:VAL38 4.2 46.0 1.0 OD2 A:ASP59 4.3 56.2 1.0 N A:THR19 4.3 43.4 1.0 O1B A:GDP1192 4.4 44.1 1.0 CA A:THR19 4.4 44.3 1.0 CG2 A:THR37 4.5 37.0 1.0 C A:PRO36 4.5 40.9 1.0 N A:THR37 4.6 43.7 1.0 CB A:THR37 4.7 39.2 1.0 CA A:VAL38 4.7 47.9 1.0 O2A A:GDP1192 4.9 40.7 1.0

N.Kuhlmann, S.Wroblowski, P.Knyphausen, S.De Boor, J.Brenig, A.Y.Zienert, K.Meyer-Teschendorf, G.J.K.Praefcke, H.Nolte, M.Kruger, M.Schacherl, U.Baumann, L.C.James, J.W.Chin, M.Lammers. Structural and Mechanistic Insights Into the Regulation of the Fundamental Rho-Regulator Rhogdi Alpha By Lysine Acetylation. J.Biol.Chem. V. 291 5484 2016.
ISSN: ISSN 0021-9258
PubMed: 26719334
DOI: 10.1074/JBC.M115.707091