Magnesium in PDB 5fyw: Transcription Initiation Complex Structures Elucidate Dna Opening (Oc)

All present enzymatic activity of Transcription Initiation Complex Structures Elucidate Dna Opening (Oc):
2.7.7.6; 3.6.4.12;

The structure of Transcription Initiation Complex Structures Elucidate Dna Opening (Oc) also contains other interesting chemical elements:

Zinc

(Zn)

10 atoms

The binding sites of Magnesium atom in the Transcription Initiation Complex Structures Elucidate Dna Opening (Oc) (pdb code 5fyw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Transcription Initiation Complex Structures Elucidate Dna Opening (Oc), PDB code: 5fyw:

Magnesium binding site 1 out of 1 in the Transcription Initiation Complex Structures Elucidate Dna Opening (Oc)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Transcription Initiation Complex Structures Elucidate Dna Opening (Oc) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2455 b:0.8 occ:1.00 OD1 A:ASP481 2.2 0.3 1.0 OD2 A:ASP485 2.3 0.6 1.0 OD1 A:ASP485 2.3 96.6 1.0 OD1 A:ASP483 2.4 0.9 1.0 CG A:ASP485 2.6 96.6 1.0 CG A:ASP481 3.1 0.2 1.0 O A:ASP481 3.3 1.0 1.0 O A:ASP483 3.4 98.6 1.0 OD2 A:ASP481 3.5 0.2 1.0 CG A:ASP483 3.6 0.4 1.0 CB A:ASP485 4.0 90.8 1.0 C A:ASP481 4.1 0.5 1.0 OD2 A:ASP483 4.2 0.9 1.0 N A:ASP483 4.2 94.5 1.0 CB A:ASP481 4.3 0.3 1.0 C A:ASP483 4.3 98.6 1.0 N A:ASP481 4.5 98.3 1.0 CA A:ASP481 4.6 99.7 1.0 N A:ASP485 4.6 83.8 1.0 CA A:ASP483 4.7 94.5 1.0 CB A:ASP483 4.7 90.0 1.0 CA A:ASP485 4.7 82.2 1.0 NH2 A:ARG446 4.9 0.6 1.0

C.Plaschka, M.Hantsche, C.Dienemann, C.Burzinski, J.Plitzko, P.Cramer. Transcription Initiation Complex Structures Elucidate Dna Opening Nature V. 533 353 2016.
ISSN: ISSN 0028-0836
PubMed: 27193681
DOI: 10.1038/NATURE17990