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Magnesium in PDB 5gv2: Crystal Structure of Arginine-Bound CASTOR1 From Homo Sapiens

Protein crystallography data

The structure of Crystal Structure of Arginine-Bound CASTOR1 From Homo Sapiens, PDB code: 5gv2 was solved by Z.C.Gai, G.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 94.66 / 2.06
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.547, 76.834, 95.223, 90.00, 96.21, 90.00
R / Rfree (%) 19 / 23.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Arginine-Bound CASTOR1 From Homo Sapiens (pdb code 5gv2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Arginine-Bound CASTOR1 From Homo Sapiens, PDB code: 5gv2:

Magnesium binding site 1 out of 1 in 5gv2

Go back to Magnesium Binding Sites List in 5gv2
Magnesium binding site 1 out of 1 in the Crystal Structure of Arginine-Bound CASTOR1 From Homo Sapiens


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Arginine-Bound CASTOR1 From Homo Sapiens within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg501

b:10.6
occ:1.00
NE2 C:HIS108 2.3 16.4 1.0
NE2 C:HIS135 2.5 25.0 1.0
CD2 C:HIS108 3.2 17.2 1.0
CE1 C:HIS135 3.3 27.5 1.0
CE1 C:HIS108 3.3 16.7 1.0
CD2 C:HIS135 3.7 23.0 1.0
CG C:HIS108 4.4 18.4 1.0
ND1 C:HIS108 4.4 17.1 1.0
ND1 C:HIS135 4.5 27.0 1.0
CG C:HIS135 4.7 23.9 1.0

Reference:

Z.Gai, Q.Wang, C.Yang, L.Wang, W.Deng, G.Wu. Structural Mechanism For the Arginine Sensing and Regulation of CASTOR1 in the MTORC1 Signaling Pathway Cell Discov V. 2 16051 2016.
ISSN: ESSN 2056-5968
PubMed: 28066558
DOI: 10.1038/CELLDISC.2016.51
Page generated: Sun Sep 29 15:26:34 2024

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