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Magnesium in PDB 5he1: Human GRK2 in Complex with Gbetagamma Subunits and CCG224062

Enzymatic activity of Human GRK2 in Complex with Gbetagamma Subunits and CCG224062

All present enzymatic activity of Human GRK2 in Complex with Gbetagamma Subunits and CCG224062:
2.7.11.15;

Protein crystallography data

The structure of Human GRK2 in Complex with Gbetagamma Subunits and CCG224062, PDB code: 5he1 was solved by M.C.Cato, J.J.G.Tesmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 3.15
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 62.023, 241.364, 212.970, 90.00, 90.00, 90.00
R / Rfree (%) 16.8 / 25

Other elements in 5he1:

The structure of Human GRK2 in Complex with Gbetagamma Subunits and CCG224062 also contains other interesting chemical elements:

Fluorine (F) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human GRK2 in Complex with Gbetagamma Subunits and CCG224062 (pdb code 5he1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human GRK2 in Complex with Gbetagamma Subunits and CCG224062, PDB code: 5he1:

Magnesium binding site 1 out of 1 in 5he1

Go back to Magnesium Binding Sites List in 5he1
Magnesium binding site 1 out of 1 in the Human GRK2 in Complex with Gbetagamma Subunits and CCG224062


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human GRK2 in Complex with Gbetagamma Subunits and CCG224062 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg702

b:0.4
occ:1.00
O A:GLU360 2.2 0.9 1.0
O A:VAL361 2.3 0.5 1.0
O A:VAL366 2.4 1.0 1.0
O A:HIS348 2.8 0.1 1.0
O A:GLN363 2.8 0.9 1.0
C A:VAL361 3.0 0.5 1.0
CE2 A:TYR368 3.2 0.8 1.0
C A:GLU360 3.3 0.1 1.0
CA A:VAL361 3.3 0.6 1.0
CD2 A:TYR368 3.4 0.5 1.0
C A:VAL366 3.5 0.9 1.0
C A:HIS348 3.6 0.2 1.0
C A:GLN363 3.7 0.7 1.0
N A:VAL361 3.8 0.6 1.0
CB A:VAL366 3.9 0.6 1.0
N A:LEU362 4.0 0.8 1.0
CA A:HIS348 4.0 0.8 1.0
CA A:VAL366 4.1 0.4 1.0
N A:GLN363 4.1 0.4 1.0
N A:VAL366 4.2 0.5 1.0
C A:LEU362 4.3 0.5 1.0
CA A:GLN363 4.4 0.5 1.0
CZ A:TYR368 4.4 0.3 1.0
O A:ALA349 4.5 0.7 1.0
N A:ALA349 4.5 0.2 1.0
CG1 A:VAL366 4.5 0.8 1.0
N A:LYS364 4.5 0.7 1.0
CA A:GLU360 4.6 0.9 1.0
C A:ALA349 4.7 0.1 1.0
N A:ALA367 4.7 0.7 1.0
O A:LEU362 4.7 0.1 1.0
CA A:LEU362 4.7 0.9 1.0
CA A:LYS364 4.7 0.2 1.0
CG A:TYR368 4.7 0.6 1.0
CB A:VAL361 4.8 0.0 1.0
OH A:TYR368 4.8 0.6 1.0
CB A:HIS348 4.9 0.7 1.0
O A:ALA367 4.9 0.9 1.0
CG2 A:VAL366 5.0 0.7 1.0
CB A:GLN363 5.0 0.1 1.0

Reference:

H.V.Waldschmidt, K.T.Homan, O.Cruz-Rodriguez, M.C.Cato, J.Waninger-Saroni, K.M.Larimore, A.Cannavo, J.Song, J.Y.Cheung, P.D.Kirchhoff, W.J.Koch, J.J.Tesmer, S.D.Larsen. Structure-Based Design, Synthesis, and Biological Evaluation of Highly Selective and Potent G Protein-Coupled Receptor Kinase 2 Inhibitors. J.Med.Chem. V. 59 3793 2016.
ISSN: ISSN 0022-2623
PubMed: 27050625
DOI: 10.1021/ACS.JMEDCHEM.5B02000
Page generated: Sun Sep 29 15:47:23 2024

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