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Magnesium in PDB 5hif: Crystal Structure of A Reconstructed Lactonase Ancestor, ANC1-Mph, of the Bacterial Methyl Parathion Hydrolase, Mph.

Enzymatic activity of Crystal Structure of A Reconstructed Lactonase Ancestor, ANC1-Mph, of the Bacterial Methyl Parathion Hydrolase, Mph.

All present enzymatic activity of Crystal Structure of A Reconstructed Lactonase Ancestor, ANC1-Mph, of the Bacterial Methyl Parathion Hydrolase, Mph.:
3.1.1.35;

Protein crystallography data

The structure of Crystal Structure of A Reconstructed Lactonase Ancestor, ANC1-Mph, of the Bacterial Methyl Parathion Hydrolase, Mph., PDB code: 5hif was solved by F.Baier, P.D.Carr, C.J.Jackson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.60 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 57.600, 88.150, 119.800, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 20.6

Other elements in 5hif:

The structure of Crystal Structure of A Reconstructed Lactonase Ancestor, ANC1-Mph, of the Bacterial Methyl Parathion Hydrolase, Mph. also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Reconstructed Lactonase Ancestor, ANC1-Mph, of the Bacterial Methyl Parathion Hydrolase, Mph. (pdb code 5hif). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Reconstructed Lactonase Ancestor, ANC1-Mph, of the Bacterial Methyl Parathion Hydrolase, Mph., PDB code: 5hif:

Magnesium binding site 1 out of 1 in 5hif

Go back to Magnesium Binding Sites List in 5hif
Magnesium binding site 1 out of 1 in the Crystal Structure of A Reconstructed Lactonase Ancestor, ANC1-Mph, of the Bacterial Methyl Parathion Hydrolase, Mph.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Reconstructed Lactonase Ancestor, ANC1-Mph, of the Bacterial Methyl Parathion Hydrolase, Mph. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg404

b:41.1
occ:1.00
OD2 B:ASP280 2.2 36.5 1.0
NH2 A:ARG285 2.8 50.5 1.0
CG B:ASP280 3.3 32.4 1.0
O B:HOH652 3.3 27.2 1.0
NH2 B:ARG285 3.6 32.0 0.5
CB B:ARG285 3.6 19.8 0.5
CB B:ARG285 3.7 22.5 0.5
CB B:ASP280 3.8 25.5 1.0
CD B:ARG285 3.8 30.7 0.5
CG B:ARG285 3.9 22.0 0.5
O B:TYR284 4.0 15.3 1.0
CG B:ARG285 4.0 27.4 0.5
CZ A:ARG285 4.0 49.6 1.0
O B:HOH664 4.0 33.8 1.0
OD1 B:ASP231 4.1 17.3 1.0
CA B:ARG285 4.2 17.4 0.5
CA B:ARG285 4.2 18.5 0.5
CD B:ARG285 4.2 22.7 0.5
OD1 B:ASP280 4.3 34.3 1.0
CZ B:ARG285 4.3 31.0 0.5
NE B:ARG285 4.4 34.0 0.5
C B:TYR284 4.4 14.1 1.0
N B:ARG285 4.5 17.0 1.0
NH1 A:ARG285 4.5 47.5 1.0

Reference:

F.Baier, P.D.Carr, C.J.Jackson. To Be Published To Be Published.
Page generated: Mon Dec 14 20:27:03 2020

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