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Magnesium in PDB 5hob: P73 Homo-Tetramerization Domain Mutant I

Protein crystallography data

The structure of P73 Homo-Tetramerization Domain Mutant I, PDB code: 5hob was solved by D.Coutandin, T.Krojer, E.Salah, S.Mathea, S.Knapp, V.Dotsch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.57 / 1.22
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 29.050, 48.400, 75.730, 89.60, 83.20, 74.27
R / Rfree (%) 18.8 / 21.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the P73 Homo-Tetramerization Domain Mutant I (pdb code 5hob). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the P73 Homo-Tetramerization Domain Mutant I, PDB code: 5hob:

Magnesium binding site 1 out of 1 in 5hob

Go back to Magnesium Binding Sites List in 5hob
Magnesium binding site 1 out of 1 in the P73 Homo-Tetramerization Domain Mutant I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of P73 Homo-Tetramerization Domain Mutant I within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg401

b:51.4
occ:1.00
HZ3 F:LYS372 2.4 50.8 1.0
HZ2 F:LYS372 2.7 50.8 1.0
NZ F:LYS372 2.9 42.3 1.0
OE2 F:GLU376 2.9 36.0 1.0
HE21 E:GLN358 3.0 64.2 1.0
HZ1 F:LYS372 3.0 50.8 1.0
H E:ARG360 3.1 58.4 1.0
HA E:VAL359 3.3 50.7 1.0
HG3 E:GLN358 3.3 55.0 1.0
N E:ARG360 3.5 48.7 1.0
CD F:GLU376 3.7 36.0 1.0
OE1 F:GLU376 3.8 40.9 1.0
NE2 E:GLN358 3.8 53.5 1.0
CB E:ARG360 3.9 42.8 1.0
CA E:VAL359 4.0 42.3 1.0
O E:GLN358 4.0 40.2 1.0
C E:VAL359 4.0 43.3 1.0
CG E:GLN358 4.2 45.9 1.0
CE F:LYS372 4.2 38.4 1.0
CA E:ARG360 4.3 45.2 1.0
HE22 E:GLN358 4.4 64.2 1.0
N E:VAL359 4.4 34.1 1.0
HE2 F:LYS372 4.4 46.0 1.0
C E:GLN358 4.4 35.1 1.0
HG2 E:GLN358 4.5 55.0 1.0
O E:HOH423 4.5 49.0 1.0
CD E:GLN358 4.6 52.6 1.0
HE3 F:LYS372 4.6 46.0 1.0
HA E:ARG360 4.8 54.3 1.0
H E:VAL359 4.9 40.9 1.0
O E:VAL359 5.0 48.5 1.0

Reference:

J.Gebel, L.Luh, D.Coutandin, F.Lohr, B.Schafer, M.Sumyk, L.Buchner, T.Krojer, E.Salah, S.Mathea, P.Guntert, S.Knapp, V.Dotsch. Structural Basis of P63/P73 Hetero-Tetramerization To Be Published.
Page generated: Mon Dec 14 20:28:15 2020

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