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Magnesium in PDB 5i10: Crystal Structure of Spinosyn Rhamnosyl 4'-O-Methyltransferase Spnh Mutant T242Q From Saccharopolyspora Spinosa

Protein crystallography data

The structure of Crystal Structure of Spinosyn Rhamnosyl 4'-O-Methyltransferase Spnh Mutant T242Q From Saccharopolyspora Spinosa, PDB code: 5i10 was solved by Y.-C.Lin, S.-P.Huang, B.-L.Huang, Y.-H.Chen, Y.-J.Chen, H.-T.Chiu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.60 / 2.00
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 54.776, 54.776, 306.532, 90.00, 90.00, 120.00
R / Rfree (%) 22.7 / 26.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Spinosyn Rhamnosyl 4'-O-Methyltransferase Spnh Mutant T242Q From Saccharopolyspora Spinosa (pdb code 5i10). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Spinosyn Rhamnosyl 4'-O-Methyltransferase Spnh Mutant T242Q From Saccharopolyspora Spinosa, PDB code: 5i10:

Magnesium binding site 1 out of 1 in 5i10

Go back to Magnesium Binding Sites List in 5i10
Magnesium binding site 1 out of 1 in the Crystal Structure of Spinosyn Rhamnosyl 4'-O-Methyltransferase Spnh Mutant T242Q From Saccharopolyspora Spinosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Spinosyn Rhamnosyl 4'-O-Methyltransferase Spnh Mutant T242Q From Saccharopolyspora Spinosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:53.3
occ:1.00
O A:HOH409 2.1 50.1 1.0
O A:HOH434 2.2 49.8 1.0
O A:HOH420 2.4 49.3 1.0
OD2 A:ASP212 2.5 42.3 1.0
OD1 A:ASP213 2.6 59.4 1.0
OD1 A:ASP185 2.6 58.5 1.0
HB3 A:ASP185 2.8 78.9 1.0
HB3 A:ASP212 2.8 47.5 1.0
CG A:ASP213 3.3 53.2 1.0
OD2 A:ASP213 3.3 59.3 1.0
CG A:ASP212 3.3 41.6 1.0
CG A:ASP185 3.4 64.0 1.0
HA A:ASP185 3.4 60.0 1.0
CB A:ASP185 3.4 65.8 1.0
CB A:ASP212 3.5 39.6 1.0
CA A:ASP185 3.9 50.0 1.0
HB2 A:ASP212 4.0 47.5 1.0
HB2 A:ASP185 4.3 78.9 1.0
HH21 A:ARG59 4.3 47.3 1.0
C A:ASP185 4.4 70.6 1.0
OD1 A:ASP212 4.4 41.9 1.0
HG21 A:ILE55 4.5 50.9 1.0
C A:ASP212 4.5 33.6 1.0
OD2 A:ASP185 4.6 63.9 1.0
CA A:ASP212 4.7 35.0 1.0
N A:ASP213 4.7 33.0 1.0
CB A:ASP213 4.7 44.3 1.0
O A:ASP185 4.8 66.0 1.0
H A:ASP213 4.8 39.6 1.0
O A:ASP212 4.8 38.5 1.0
H A:GLY186 4.8 63.5 1.0
N A:GLY186 4.9 52.9 1.0

Reference:

Y.-C.Lin, S.-P.Huang, B.-L.Huang, Y.-H.Chen, Y.-J.Chen, H.-T.Chiu. Crystal Structure of Spinosyn Rhamnosyl 4'-O-Methyltransferase Spnh Mutant T242Q From Saccharopolyspora Spinosa To Be Published.
Page generated: Mon Dec 14 20:29:12 2020

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