Atomistry » Magnesium » PDB 5hr7-5i9e » 5i4e
Atomistry »
  Magnesium »
    PDB 5hr7-5i9e »
      5i4e »

Magnesium in PDB 5i4e: Crystal Structure of Human Nonmuscle Myosin 2C Motor Domain

Protein crystallography data

The structure of Crystal Structure of Human Nonmuscle Myosin 2C Motor Domain, PDB code: 5i4e was solved by K.Chinthalapudi, S.M.Heissler, M.Preller, J.R.Sellers, D.J.Manstein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.77 / 2.25
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 81.120, 125.610, 153.960, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 24.1

Other elements in 5i4e:

The structure of Crystal Structure of Human Nonmuscle Myosin 2C Motor Domain also contains other interesting chemical elements:

Vanadium (V) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Human Nonmuscle Myosin 2C Motor Domain (pdb code 5i4e). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human Nonmuscle Myosin 2C Motor Domain, PDB code: 5i4e:

Magnesium binding site 1 out of 1 in 5i4e

Go back to Magnesium Binding Sites List in 5i4e
Magnesium binding site 1 out of 1 in the Crystal Structure of Human Nonmuscle Myosin 2C Motor Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human Nonmuscle Myosin 2C Motor Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1501

b:23.4
occ:1.00
O A:HOH1609 1.9 98.6 1.0
OG1 A:THR205 2.0 40.5 1.0
O1G A:AOV1500 2.1 33.2 1.0
OG A:SER260 2.2 41.5 1.0
O2B A:AOV1500 2.3 29.3 1.0
O A:HOH1639 2.6 19.9 1.0
CB A:THR205 3.0 33.1 1.0
CB A:SER260 3.4 34.9 1.0
O3B A:AOV1500 3.5 30.9 1.0
PB A:AOV1500 3.5 30.0 1.0
N A:SER260 3.6 30.6 1.0
VG A:AOV1500 3.6 30.4 1.0
O2A A:AOV1500 3.7 37.6 1.0
CG2 A:THR205 3.7 23.5 1.0
O A:ASN258 4.0 31.7 1.0
CA A:SER260 4.1 29.4 1.0
CA A:THR205 4.2 24.8 1.0
O3A A:AOV1500 4.2 29.8 1.0
PA A:AOV1500 4.2 35.4 1.0
N A:THR205 4.3 26.0 1.0
ND2 A:ASN256 4.4 32.6 1.0
O1A A:AOV1500 4.4 34.4 1.0
O A:HOH1615 4.5 79.5 1.0
C A:SER259 4.5 33.6 1.0
O A:HOH1605 4.6 25.3 1.0
O2G A:AOV1500 4.6 32.9 1.0
O1B A:AOV1500 4.6 36.2 1.0
OD1 A:ASP478 4.7 38.2 1.0
O4G A:AOV1500 4.7 29.2 1.0
ND2 A:ASN250 4.7 32.4 1.0
CA A:SER259 4.8 30.4 1.0
OD2 A:ASP478 5.0 41.0 1.0

Reference:

K.Chinthalapudi, S.M.Heissler, M.Preller, J.R.Sellers, D.J.Manstein. Mechanistic Insights Into the Active Site and Allosteric Communication Pathways in Human Nonmuscle Myosin-2C. Elife V. 6 2017.
ISSN: ESSN 2050-084X
PubMed: 29256864
DOI: 10.7554/ELIFE.32742
Page generated: Sun Sep 29 16:39:09 2024

Last articles

Cl in 3RAY
Cl in 3RAD
Cl in 3R9C
Cl in 3R9R
Cl in 3R7C
Cl in 3R9Q
Cl in 3R9L
Cl in 3R8H
Cl in 3R8D
Cl in 3R7T
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy