Atomistry » Magnesium » PDB 5imp-5ivg » 5ir4
Atomistry »
  Magnesium »
    PDB 5imp-5ivg »
      5ir4 »

Magnesium in PDB 5ir4: Crystal Structure of Wild-Type Bacterial Lipoxygenase From Pseudomonas Aeruginosa Pa-Lox with Space Group C2221 at 1.48 A Resolution

Enzymatic activity of Crystal Structure of Wild-Type Bacterial Lipoxygenase From Pseudomonas Aeruginosa Pa-Lox with Space Group C2221 at 1.48 A Resolution

All present enzymatic activity of Crystal Structure of Wild-Type Bacterial Lipoxygenase From Pseudomonas Aeruginosa Pa-Lox with Space Group C2221 at 1.48 A Resolution:
1.13.11.12; 1.13.11.13;

Protein crystallography data

The structure of Crystal Structure of Wild-Type Bacterial Lipoxygenase From Pseudomonas Aeruginosa Pa-Lox with Space Group C2221 at 1.48 A Resolution, PDB code: 5ir4 was solved by J.Kalms, S.Banthiya, E.Galemou Yoga, H.Kuhn, P.Scheerer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.97 / 1.48
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 83.744, 97.391, 153.839, 90.00, 90.00, 90.00
R / Rfree (%) 13.6 / 15.5

Other elements in 5ir4:

The structure of Crystal Structure of Wild-Type Bacterial Lipoxygenase From Pseudomonas Aeruginosa Pa-Lox with Space Group C2221 at 1.48 A Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom
Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Wild-Type Bacterial Lipoxygenase From Pseudomonas Aeruginosa Pa-Lox with Space Group C2221 at 1.48 A Resolution (pdb code 5ir4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Wild-Type Bacterial Lipoxygenase From Pseudomonas Aeruginosa Pa-Lox with Space Group C2221 at 1.48 A Resolution, PDB code: 5ir4:

Magnesium binding site 1 out of 1 in 5ir4

Go back to Magnesium Binding Sites List in 5ir4
Magnesium binding site 1 out of 1 in the Crystal Structure of Wild-Type Bacterial Lipoxygenase From Pseudomonas Aeruginosa Pa-Lox with Space Group C2221 at 1.48 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Wild-Type Bacterial Lipoxygenase From Pseudomonas Aeruginosa Pa-Lox with Space Group C2221 at 1.48 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg711

b:23.8
occ:0.50
 O A:HOH978 2.0 28.1 1.0
O A:HOH1251 2.1 27.4 1.0
OE1 A:GLU133 2.3 27.0 1.0
CD A:GLU133 3.2 28.7 1.0
OE2 A:GLU133 3.5 29.8 1.0
O A:HOH847 4.2 35.3 1.0
CA A:ALA130 4.6 24.0 1.0
CG A:GLU133 4.6 28.4 1.0
O A:ALA126 4.8 19.2 1.0
CB A:ALA130 4.8 25.6 1.0

Reference:

S.Banthiya, J.Kalms, E.Galemou Yoga, I.Ivanov, X.Carpena, M.Hamberg, H.Kuhn, P.Scheerer. Structural and Functional Basis of Phospholipid Oxygenase Activity of Bacterial Lipoxygenase From Pseudomonas Aeruginosa. Biochim.Biophys.Acta V.1861 1681 2016.
ISSN: ISSN 0006-3002
PubMed: 27500637
DOI: 10.1016/J.BBALIP.2016.08.002
Page generated: Sun Sep 29 16:54:00 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy