Magnesium in PDB 5j1t: Torsinadeltae-LULL1 Complex, H. Sapiens, Bound to Vhh-BS2

The structure of Torsinadeltae-LULL1 Complex, H. Sapiens, Bound to Vhh-BS2, PDB code: 5j1t was solved by F.E.Demircioglu, T.U.Schwartz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	67.73 / 1.40
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	75.435, 88.445, 105.331, 90.00, 90.00, 90.00
R / Rfree (%)	14.8 / 17.7

The structure of Torsinadeltae-LULL1 Complex, H. Sapiens, Bound to Vhh-BS2 also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Magnesium atom in the Torsinadeltae-LULL1 Complex, H. Sapiens, Bound to Vhh-BS2 (pdb code 5j1t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Torsinadeltae-LULL1 Complex, H. Sapiens, Bound to Vhh-BS2, PDB code: 5j1t:

Magnesium binding site 1 out of 1 in the Torsinadeltae-LULL1 Complex, H. Sapiens, Bound to Vhh-BS2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Torsinadeltae-LULL1 Complex, H. Sapiens, Bound to Vhh-BS2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:14.5 occ:1.00 OD1 A:ASN109 2.0 14.4 1.0 O2G A:ATP401 2.0 11.4 1.0 O A:HOH548 2.1 15.0 1.0 O A:HOH537 2.1 14.1 1.0 O2B A:ATP401 2.1 12.6 1.0 O A:HOH573 2.2 11.7 1.0 CG A:ASN109 3.1 13.9 1.0 PG A:ATP401 3.2 12.7 1.0 PB A:ATP401 3.3 12.1 1.0 O3B A:ATP401 3.5 12.6 1.0 OD1 A:ASP170 3.9 16.1 1.0 CB A:ASN109 3.9 13.4 1.0 NH1 B:ARG449 3.9 12.6 1.0 ND2 A:ASN109 4.0 16.8 1.0 OD2 A:ASP170 4.0 17.2 1.0 O3G A:ATP401 4.1 14.0 1.0 O B:HOH596 4.1 16.0 1.0 NE2 A:GLN171 4.1 21.6 1.0 O3A A:ATP401 4.1 12.5 1.0 O2A A:ATP401 4.2 13.1 1.0 NZ A:LYS319 4.2 13.6 1.0 N A:ASN109 4.2 12.9 1.0 O A:HOH685 4.3 19.5 1.0 CG A:ASP170 4.4 15.5 1.0 O1G A:ATP401 4.4 13.7 1.0 O1B A:ATP401 4.5 12.6 1.0 CA A:ASN109 4.6 13.3 1.0 PA A:ATP401 4.7 13.0 1.0 CD1 A:LEU206 4.9 15.9 1.0

F.E.Demircioglu, B.A.Sosa, J.Ingram, H.L.Ploegh, T.U.Schwartz. Structures of Torsina and Its Disease-Mutant Complexed with An Activator Reveal the Molecular Basis For Primary Dystonia. Elife V. 5 2016.
ISSN: ESSN 2050-084X
PubMed: 27490483
DOI: 10.7554/ELIFE.17983