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Magnesium in PDB 5ju4: Crystal Structure of A Dna Sequence D(Cgtgaattcacg) at 130K

Protein crystallography data

The structure of Crystal Structure of A Dna Sequence D(Cgtgaattcacg) at 130K, PDB code: 5ju4 was solved by H.Sbirkova, B.Schivachev, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.76 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 24.503, 41.090, 65.184, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 29.2

Other elements in 5ju4:

The structure of Crystal Structure of A Dna Sequence D(Cgtgaattcacg) at 130K also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Dna Sequence D(Cgtgaattcacg) at 130K (pdb code 5ju4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Dna Sequence D(Cgtgaattcacg) at 130K, PDB code: 5ju4:

Magnesium binding site 1 out of 1 in 5ju4

Go back to Magnesium Binding Sites List in 5ju4
Magnesium binding site 1 out of 1 in the Crystal Structure of A Dna Sequence D(Cgtgaattcacg) at 130K


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Dna Sequence D(Cgtgaattcacg) at 130K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg101

b:71.2
occ:1.00
CL A:CL102 2.2 85.9 1.0
O A:HOH201 2.4 34.3 1.0
C6 A:DC1 4.0 27.4 1.0
C5 A:DC1 4.2 27.4 1.0
C2' A:DC1 4.4 36.1 1.0
N7 A:DG2 4.6 25.2 1.0
O B:HOH101 4.6 32.8 1.0
N1 A:DC1 4.8 27.4 1.0
O A:HOH224 5.0 47.9 1.0

Reference:

H.I.Sbirkova, B.L.Schivachev. Crystal Structure of A Dna Sequence D(Cgtgaattcacg) at 130K Bul.Chem.Commn. V. 48 589 2016.
ISSN: ISSN 0324-1130
Page generated: Mon Dec 14 20:34:33 2020

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