Magnesium in PDB 5k6t: Crystal Structure of Arabidopsis Thaliana Acetohydroxyacid Synthase in Complex with A Sulfonylamino-Carbonyl-Triazolinone Herbicide, Propoxycarbazone-Sodium

Enzymatic activity of Crystal Structure of Arabidopsis Thaliana Acetohydroxyacid Synthase in Complex with A Sulfonylamino-Carbonyl-Triazolinone Herbicide, Propoxycarbazone-Sodium

All present enzymatic activity of Crystal Structure of Arabidopsis Thaliana Acetohydroxyacid Synthase in Complex with A Sulfonylamino-Carbonyl-Triazolinone Herbicide, Propoxycarbazone-Sodium:
2.2.1.6;

Protein crystallography data

The structure of Crystal Structure of Arabidopsis Thaliana Acetohydroxyacid Synthase in Complex with A Sulfonylamino-Carbonyl-Triazolinone Herbicide, Propoxycarbazone-Sodium, PDB code: 5k6t was solved by M.D.Garcia, T.Lonhienne, L.W.Guddat, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	45.01 / 2.76
*Space group*	P 6₄ 2 2
*Cell size a, b, c (Å), α, β, γ (°)*	180.025, 180.025, 186.157, 90.00, 90.00, 120.00
*R / R_free (%)*	14.1 / 17.7

Other elements in 5k6t:

Potassium

(K)

1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Arabidopsis Thaliana Acetohydroxyacid Synthase in Complex with A Sulfonylamino-Carbonyl-Triazolinone Herbicide, Propoxycarbazone-Sodium (pdb code 5k6t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Arabidopsis Thaliana Acetohydroxyacid Synthase in Complex with A Sulfonylamino-Carbonyl-Triazolinone Herbicide, Propoxycarbazone-Sodium, PDB code: 5k6t:

Magnesium binding site 1 out of 1 in 5k6t

Go back to

Magnesium Binding Sites List in 5k6t

Magnesium binding site 1 out of 1 in the Crystal Structure of Arabidopsis Thaliana Acetohydroxyacid Synthase in Complex with A Sulfonylamino-Carbonyl-Triazolinone Herbicide, Propoxycarbazone-Sodium

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Arabidopsis Thaliana Acetohydroxyacid Synthase in Complex with A Sulfonylamino-Carbonyl-Triazolinone Herbicide, Propoxycarbazone-Sodium within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Mg701 b:44.9 occ:1.00	OD1	A:ASN565	2.1	60.0	1.0
	O13	A:TZD706	2.1	52.9	1.0
	O	A:HIS567	2.1	54.8	1.0
	OD1	A:ASP538	2.2	71.7	1.0
	O	A:HOH906	2.4	49.5	1.0
	O22	A:TZD706	2.5	44.5	1.0
	CG	A:ASN565	3.1	51.1	1.0
	CG	A:ASP538	3.3	56.8	1.0
	C	A:HIS567	3.4	46.5	1.0
	P1	A:TZD706	3.4	59.8	1.0
	ND2	A:ASN565	3.6	57.0	1.0
	P2	A:TZD706	3.7	53.6	1.0
	OD2	A:ASP538	3.8	50.4	1.0
	O11	A:TZD706	3.8	92.9	1.0
	N	A:HIS567	3.9	49.1	1.0
	N	A:ASP538	4.0	39.4	1.0
	N	A:GLY569	4.2	45.0	1.0
	O5G	A:TZD706	4.2	89.0	1.0
	CA	A:HIS567	4.2	42.0	1.0
	N	A:GLY539	4.3	33.6	1.0
	N	A:LEU568	4.3	46.0	1.0
	N	A:ASN565	4.3	45.6	1.0
	CB	A:ASN565	4.5	40.9	1.0
	CA	A:LEU568	4.5	48.8	1.0
	O12	A:TZD706	4.5	58.6	1.0
	CD1	A:LEU588	4.5	49.4	1.0
	O	A:HOH972	4.5	65.2	1.0
	O23	A:TZD706	4.6	61.0	1.0
	CB	A:ASP538	4.6	47.1	1.0
	N	A:GLN566	4.6	58.0	1.0
	O	A:LEU563	4.7	56.4	1.0
	CA	A:GLY537	4.7	38.0	1.0
	C	A:GLY537	4.7	33.9	1.0
	CA	A:ASP538	4.7	49.3	1.0
	CA	A:ASN565	4.7	43.5	1.0
	C	A:ASN565	4.8	57.2	1.0
	O21	A:TZD706	4.8	53.0	1.0
	C	A:LEU568	4.8	53.2	1.0
	C	A:GLN566	5.0	48.2	1.0

Reference:

M.D.Garcia, A.Nouwens, T.G.Lonhienne, L.W.Guddat. Comprehensive Understanding of Acetohydroxyacid Synthase Inhibition By Different Herbicide Families. Proc. Natl. Acad. Sci. V. 114 E1091 2017U.S.A..
ISSN: ESSN 1091-6490
PubMed: 28137884
DOI: 10.1073/PNAS.1616142114

Page generated: Sun Sep 29 18:51:56 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy