Magnesium in PDB 5kl0: Crystal Structure of Phosphoglucomutase From Xanthomonas Citri Citri Complexed with Glucose-1,6-Biphosphate

The structure of Crystal Structure of Phosphoglucomutase From Xanthomonas Citri Citri Complexed with Glucose-1,6-Biphosphate, PDB code: 5kl0 was solved by L.S.Goto, H.M.Pereira, M.T.M.Novo Mansur, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.61 / 1.85
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	43.980, 54.788, 173.495, 90.00, 90.00, 90.00
R / Rfree (%)	14.6 / 18.5

The binding sites of Magnesium atom in the Crystal Structure of Phosphoglucomutase From Xanthomonas Citri Citri Complexed with Glucose-1,6-Biphosphate (pdb code 5kl0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Phosphoglucomutase From Xanthomonas Citri Citri Complexed with Glucose-1,6-Biphosphate, PDB code: 5kl0:

Magnesium binding site 1 out of 1 in the Crystal Structure of Phosphoglucomutase From Xanthomonas Citri Citri Complexed with Glucose-1,6-Biphosphate


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Phosphoglucomutase From Xanthomonas Citri Citri Complexed with Glucose-1,6-Biphosphate within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:1.4 occ:1.00 O2P A:SEP119 1.8 50.1 1.0 OD1 A:ASP261 2.0 12.9 1.0 OD1 A:ASP263 2.1 11.4 1.0 OD2 A:ASP259 2.1 11.1 1.0 O A:HOH608 2.3 62.6 1.0 CG A:ASP261 2.8 13.7 1.0 OD2 A:ASP261 2.9 18.2 1.0 CG A:ASP259 3.0 12.2 1.0 P A:SEP119 3.0 55.6 1.0 CG A:ASP263 3.0 19.7 1.0 OD2 A:ASP263 3.4 20.1 1.0 OD1 A:ASP259 3.4 9.1 1.0 O3P A:SEP119 3.5 41.2 1.0 O1P A:SEP119 3.5 50.5 1.0 NZ A:LYS129 3.9 34.4 1.0 CB A:ASP259 4.3 9.5 1.0 N A:ASP263 4.3 6.6 1.0 CB A:ASP261 4.3 13.2 1.0 NE A:ARG264 4.4 25.1 1.0 OG A:SEP119 4.4 62.5 1.0 CB A:ASP263 4.4 10.6 1.0 CG A:ARG264 4.5 11.6 1.0 N A:ARG264 4.6 6.1 1.0 N A:ASP261 4.7 8.6 1.0 CA A:ASP263 4.7 11.7 1.0 CB A:SEP119 4.8 47.3 1.0 C A:ASP261 4.8 8.8 1.0 CA A:ASP261 4.8 11.4 1.0 O1X A:G16501 4.9 50.3 1.0 C A:ASP263 4.9 9.6 1.0 CD A:ARG264 4.9 17.5 1.0 CA A:SEP119 4.9 37.2 1.0 N A:PHE262 4.9 8.7 1.0 CB A:ARG264 5.0 6.2 1.0

L.S.Goto, A.Vessoni Alexandrino, C.Malvessi Pereira, C.Silva Martins, H.D'muniz Pereira, J.Brandao-Neto, M.T.Marques Novo-Mansur. Structural and Functional Characterization of the Phosphoglucomutase From Xanthomonas Citri Subsp. Citri. Biochim.Biophys.Acta V.1864 1658 2016.
ISSN: ISSN 0006-3002
PubMed: 27567706
DOI: 10.1016/J.BBAPAP.2016.08.014