Magnesium in PDB 5l9n: Structure of Uridylylated Glnb From Escherichia Coli Bound to Atp

The structure of Structure of Uridylylated Glnb From Escherichia Coli Bound to Atp, PDB code: 5l9n was solved by V.Rubio, C.Palanca, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.10 / 1.90
Space group	I 21 3
Cell size a, b, c (Å), α, β, γ (°)	88.868, 88.868, 88.868, 90.00, 90.00, 90.00
R / Rfree (%)	18.4 / 22.3

The binding sites of Magnesium atom in the Structure of Uridylylated Glnb From Escherichia Coli Bound to Atp (pdb code 5l9n). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Uridylylated Glnb From Escherichia Coli Bound to Atp, PDB code: 5l9n:

Magnesium binding site 1 out of 1 in the Structure of Uridylylated Glnb From Escherichia Coli Bound to Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Uridylylated Glnb From Escherichia Coli Bound to Atp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg202 b:19.1 occ:0.73 O A:PHE11 2.2 30.1 1.0 OD1 A:ASP15 2.6 30.5 1.0 OD1 A:ASP14 2.7 30.7 1.0 C A:PHE11 3.4 31.3 1.0 CG A:ASP14 3.6 32.9 1.0 CG A:ASP15 3.7 35.0 1.0 OD2 A:ASP14 3.8 28.9 1.0 OD2 A:ASP15 4.2 40.1 1.0 CA A:PHE11 4.2 25.9 1.0 CB A:PHE11 4.3 27.8 1.0 O A:HOH318 4.3 23.3 1.0 N A:LYS12 4.4 26.3 1.0 CA A:LYS12 4.5 21.1 1.0 CD1 A:PHE11 4.7 40.7 1.0 N A:ASP15 4.7 23.6 1.0 CB A:ASP15 5.0 28.1 1.0

C.Palanca, V.Rubio. Effects of T-Loop Modification on the Pii-Signalling Protein: Structure of Uridylylated Escherichia Coli Glnb Bound to Atp. Environ Microbiol Rep V. 9 290 2017.
ISSN: ESSN 1758-2229
PubMed: 28345298
DOI: 10.1111/1758-2229.12533