Magnesium in PDB 5m04: Structure of Obge From Escherichia Coli

The structure of Structure of Obge From Escherichia Coli, PDB code: 5m04 was solved by S.Gkekas, R.K.Singh, W.Versees, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	88.73 / 1.85
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	64.590, 83.000, 177.460, 90.00, 90.00, 90.00
R / Rfree (%)	19.8 / 23.9

The binding sites of Magnesium atom in the Structure of Obge From Escherichia Coli (pdb code 5m04). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Obge From Escherichia Coli, PDB code: 5m04:

Magnesium binding site 1 out of 1 in the Structure of Obge From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Obge From Escherichia Coli within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:63.2 occ:1.00 O1B A:GDP401 2.8 41.9 1.0 OG A:SER173 3.3 44.7 1.0 O3B A:GDP401 3.3 43.4 1.0 O2A A:GDP401 3.4 46.2 1.0 PB A:GDP401 3.6 39.3 1.0 O A:HOH550 3.6 60.6 1.0 CB A:SER173 4.0 41.2 1.0 O3A A:GDP401 4.2 40.8 1.0 PA A:GDP401 4.2 43.6 1.0 O1A A:GDP401 4.8 41.7 1.0 O A:HOH518 4.8 62.1 1.0

S.Gkekas, R.K.Singh, A.V.Shkumatov, J.Messens, M.Fauvart, N.Verstraeten, J.Michiels, W.Versees. Structural and Biochemical Analysis of Escherichia Coli Obge, A Central Regulator of Bacterial Persistence. J. Biol. Chem. V. 292 5871 2017.
ISSN: ESSN 1083-351X
PubMed: 28223358
DOI: 10.1074/JBC.M116.761809