Magnesium in PDB 5m1m: Crystal Structure of Matrix Protein 1 From Influenza C Virus (Strain C/Ann Arbor/1/1950)

The structure of Crystal Structure of Matrix Protein 1 From Influenza C Virus (Strain C/Ann Arbor/1/1950), PDB code: 5m1m was solved by J.Radzimanowski, W.Weissenhorn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.50 / 1.50
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	66.398, 26.841, 77.224, 90.00, 108.40, 90.00
R / Rfree (%)	18.8 / 22

The binding sites of Magnesium atom in the Crystal Structure of Matrix Protein 1 From Influenza C Virus (Strain C/Ann Arbor/1/1950) (pdb code 5m1m). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Matrix Protein 1 From Influenza C Virus (Strain C/Ann Arbor/1/1950), PDB code: 5m1m:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Matrix Protein 1 From Influenza C Virus (Strain C/Ann Arbor/1/1950)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Matrix Protein 1 From Influenza C Virus (Strain C/Ann Arbor/1/1950) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:30.0 occ:1.00 OD1 A:ASN80 2.0 20.7 1.0 O A:HOH386 2.0 25.6 1.0 OD2 A:ASP130 2.0 19.7 1.0 OE2 A:GLU126 2.1 20.5 1.0 O A:HOH326 2.1 21.7 1.0 O A:HOH390 2.2 27.3 1.0 CG A:ASP130 3.1 20.2 1.0 CD A:GLU126 3.1 21.0 1.0 CG A:ASN80 3.1 25.6 1.0 OD1 A:ASP130 3.4 20.6 1.0 CG A:GLU126 3.5 16.8 1.0 O A:HOH312 3.7 23.2 1.0 ND2 A:ASN80 3.7 26.8 1.0 O A:HOH316 4.1 23.6 1.0 O A:SER76 4.1 20.4 0.5 O A:SER76 4.2 20.4 0.5 OE1 A:GLU126 4.3 20.5 1.0 CB A:ASN80 4.4 19.7 1.0 OG A:SER76 4.4 23.1 0.5 CB A:ASP130 4.4 17.6 1.0 N A:ASN80 4.5 19.6 1.0 CA A:ASN80 4.5 20.2 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Matrix Protein 1 From Influenza C Virus (Strain C/Ann Arbor/1/1950)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Matrix Protein 1 From Influenza C Virus (Strain C/Ann Arbor/1/1950) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg202 b:30.0 occ:1.00 OE1 A:GLU126 2.0 20.5 1.0 O A:HOH324 2.1 21.8 1.0 O A:HOH316 2.1 23.6 1.0 O A:HOH329 2.1 22.4 1.0 OE1 A:GLU123 2.2 18.8 1.0 OG1 A:THR83 2.2 20.3 1.0 CD A:GLU126 3.0 21.0 1.0 CD A:GLU123 3.2 20.6 1.0 CB A:THR83 3.2 18.6 1.0 OE2 A:GLU126 3.4 20.5 1.0 OE2 A:GLU123 3.4 25.6 1.0 CG2 A:THR83 4.0 20.2 1.0 O A:THR83 4.0 23.0 1.0 O A:HOH337 4.1 37.5 1.0 O A:HOH340 4.2 27.2 1.0 O A:HOH404 4.3 30.2 1.0 CG A:GLU126 4.4 16.8 1.0 CA A:THR83 4.4 18.1 1.0 C A:THR83 4.4 23.2 1.0 O A:LEU79 4.5 20.4 1.0 CG A:GLU123 4.6 19.7 1.0 CB A:GLU126 4.7 16.4 1.0 O A:HOH343 4.7 31.3 1.0 CB A:GLU123 4.9 18.4 1.0

D.Saletti, J.Radzimanowski, G.Effantin, D.Midtvedt, S.Mangenot, W.Weissenhorn, P.Bassereau, M.Bally. The Matrix Protein M1 From Influenza C Virus Induces Tubular Membrane Invaginations in An in Vitro Cell Membrane Model. Sci Rep V. 7 40801 2017.
ISSN: ESSN 2045-2322
PubMed: 28120862
DOI: 10.1038/SREP40801