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Magnesium in PDB 5m50: Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins (pdb code 5m50). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins, PDB code: 5m50:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 5m50

Go back to Magnesium Binding Sites List in 5m50
Magnesium binding site 1 out of 2 in the Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg502

b:0.4
occ:1.00
O D:HOH602 2.1 0.1 1.0
O2B D:GTP501 2.1 0.3 1.0
O D:HOH603 2.1 0.1 1.0
O D:HOH601 2.1 0.0 1.0
O1G D:GTP501 2.2 0.3 1.0
CB D:GLN11 2.5 0.5 1.0
PB D:GTP501 2.8 0.3 1.0
O3A D:GTP501 3.0 0.3 1.0
O3B D:GTP501 3.0 0.3 1.0
PG D:GTP501 3.1 0.3 1.0
N D:GLN11 3.1 0.5 1.0
OE1 D:GLN11 3.2 0.5 1.0
O1A D:GTP501 3.2 0.3 1.0
O2A D:GTP501 3.2 0.3 1.0
PA D:GTP501 3.3 0.3 1.0
CA D:GLN11 3.4 0.5 1.0
O E:HOH601 3.5 0.9 1.0
CG D:GLN11 3.7 0.5 1.0
CD D:GLN11 3.8 0.5 1.0
NZ E:LYS254 3.9 0.5 1.0
O3G D:GTP501 3.9 0.3 1.0
O1B D:GTP501 4.2 0.3 1.0
C D:GLY10 4.3 0.2 1.0
O2G D:GTP501 4.4 0.3 1.0
C D:GLN11 4.5 0.5 1.0
CA D:GLY10 4.7 0.2 1.0
N D:ALA12 4.7 0.5 1.0
OE1 D:GLU71 4.8 0.1 1.0
OD1 D:ASP69 4.9 0.7 1.0
OG1 D:THR145 4.9 0.2 1.0
O5' D:GTP501 4.9 0.3 1.0

Magnesium binding site 2 out of 2 in 5m50

Go back to Magnesium Binding Sites List in 5m50
Magnesium binding site 2 out of 2 in the Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:0.9
occ:1.00
O2B A:GTP501 2.1 0.6 1.0
O A:HOH602 2.1 0.1 1.0
O A:HOH601 2.1 0.9 1.0
O1G A:GTP501 2.2 0.6 1.0
O A:HOH603 2.3 1.0 1.0
CB A:GLN11 2.5 0.7 1.0
PB A:GTP501 2.8 0.6 1.0
O3A A:GTP501 3.0 0.6 1.0
OE1 A:GLN11 3.0 0.7 1.0
O1A A:GTP501 3.1 0.6 1.0
O3B A:GTP501 3.1 0.6 1.0
PG A:GTP501 3.1 0.6 1.0
O2A A:GTP501 3.2 0.6 1.0
N A:GLN11 3.2 0.7 1.0
PA A:GTP501 3.2 0.6 1.0
CA A:GLN11 3.5 0.7 1.0
O B:HOH601 3.5 0.3 1.0
CG A:GLN11 3.7 0.7 1.0
NZ B:LYS254 3.8 0.4 1.0
CD A:GLN11 3.8 0.7 1.0
O3G A:GTP501 3.9 0.6 1.0
O1B A:GTP501 4.2 0.6 1.0
C A:GLY10 4.4 0.6 1.0
O2G A:GTP501 4.4 0.6 1.0
C A:GLN11 4.6 0.7 1.0
N A:ALA12 4.7 0.8 1.0
CA A:GLY10 4.8 0.6 1.0
O5' A:GTP501 4.8 0.6 1.0
OE1 A:GLU71 4.8 0.9 1.0
OD1 A:ASP69 4.9 0.3 1.0
CE B:LYS254 5.0 0.4 1.0

Reference:

J.Atherton, K.Jiang, M.M.Stangier, Y.Luo, S.Hua, K.Houben, J.J.E.Van Hooff, A.P.Joseph, G.Scarabelli, B.J.Grant, A.J.Roberts, M.Topf, M.O.Steinmetz, M.Baldus, C.A.Moores, A.Akhmanova. A Structural Model For Microtubule Minus-End Recognition and Protection By Camsap Proteins. Nat. Struct. Mol. Biol. V. 24 931 2017.
ISSN: ESSN 1545-9985
PubMed: 28991265
DOI: 10.1038/NSMB.3483
Page generated: Mon Dec 14 20:50:23 2020

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