Magnesium in PDB 5m54: Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins

The binding sites of Magnesium atom in the Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins (pdb code 5m54). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins, PDB code: 5m54:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg502 b:0.7 occ:1.00 O2B D:GTP501 2.1 0.8 1.0 O D:HOH604 2.1 0.0 1.0 O D:HOH601 2.2 0.8 1.0 O2G D:GTP501 2.4 0.8 1.0 N D:GLN11 2.6 0.3 1.0 O D:HOH602 2.6 0.9 1.0 CB D:GLN11 2.8 0.3 1.0 PB D:GTP501 3.1 0.8 1.0 O3B D:GTP501 3.1 0.8 1.0 CA D:GLN11 3.2 0.3 1.0 PG D:GTP501 3.3 0.8 1.0 O D:HOH603 3.3 0.7 1.0 C D:GLY10 3.5 0.1 1.0 OD1 D:ASP69 3.5 0.8 1.0 CA D:GLY10 3.8 0.1 1.0 O3A D:GTP501 3.9 0.8 1.0 O1A D:GTP501 4.0 0.8 1.0 OD2 D:ASP69 4.1 0.8 1.0 OE1 D:GLN11 4.1 0.3 1.0 CG D:ASP69 4.1 0.8 1.0 OG1 D:THR145 4.2 0.6 1.0 CG D:GLN11 4.2 0.3 1.0 O1G D:GTP501 4.3 0.8 1.0 CB D:THR145 4.3 0.6 1.0 O1B D:GTP501 4.3 0.8 1.0 O3G D:GTP501 4.4 0.8 1.0 NZ E:LYS254 4.5 0.9 1.0 PA D:GTP501 4.5 0.8 1.0 C D:GLN11 4.5 0.3 1.0 O D:GLY10 4.6 0.1 1.0 CD D:GLN11 4.6 0.3 1.0 O2A D:GTP501 4.8 0.8 1.0 N D:ALA12 4.8 0.5 1.0 OE1 D:GLU71 4.9 0.6 1.0

Magnesium binding site 2 out of 2 in the Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Mechanism of Microtubule Minus-End Recognition and Protection By Camsap Proteins within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:0.5 occ:1.00 O2B A:GTP501 2.1 0.2 1.0 O A:HOH604 2.1 0.8 1.0 O A:HOH601 2.4 0.8 1.0 O2G A:GTP501 2.4 0.2 1.0 N A:GLN11 2.5 0.8 1.0 O3B A:GTP501 2.8 0.2 1.0 PB A:GTP501 2.9 0.2 1.0 O A:HOH602 3.0 0.4 1.0 PG A:GTP501 3.1 0.2 1.0 CB A:GLN11 3.2 0.8 1.0 C A:GLY10 3.4 0.8 1.0 OD1 A:ASP69 3.4 1.0 1.0 CA A:GLN11 3.4 0.8 1.0 CA A:GLY10 3.4 0.8 1.0 O A:HOH603 3.6 0.1 1.0 OG1 A:THR145 3.8 0.4 1.0 CB A:THR145 3.9 0.4 1.0 O3A A:GTP501 3.9 0.2 1.0 CG A:ASP69 4.0 1.0 1.0 O1G A:GTP501 4.0 0.2 1.0 OD2 A:ASP69 4.0 1.0 1.0 O1B A:GTP501 4.1 0.2 1.0 O1A A:GTP501 4.2 0.2 1.0 O3G A:GTP501 4.4 0.2 1.0 O A:GLY10 4.5 0.8 1.0 OE1 A:GLN11 4.5 0.8 1.0 CG A:GLN11 4.6 0.8 1.0 PA A:GTP501 4.6 0.2 1.0 C A:GLN11 4.7 0.8 1.0 N A:GLY10 4.8 0.8 1.0 NZ B:LYS254 4.8 0.1 1.0 CG2 A:THR145 4.8 0.4 1.0 N A:THR145 4.8 0.4 1.0 N A:ALA12 4.9 0.6 1.0 CA A:THR145 5.0 0.4 1.0

J.Atherton, K.Jiang, M.M.Stangier, Y.Luo, S.Hua, K.Houben, J.J.E.Van Hooff, A.P.Joseph, G.Scarabelli, B.J.Grant, A.J.Roberts, M.Topf, M.O.Steinmetz, M.Baldus, C.A.Moores, A.Akhmanova. A Structural Model For Microtubule Minus-End Recognition and Protection By Camsap Proteins. Nat. Struct. Mol. Biol. V. 24 931 2017.
ISSN: ESSN 1545-9985
PubMed: 28991265
DOI: 10.1038/NSMB.3483