Magnesium in PDB 5mru: Tetr(Class A) in Complex with 5A,6-Anhydrotetracycline and Magnesium

Protein crystallography data

The structure of Tetr(Class A) in Complex with 5A,6-Anhydrotetracycline and Magnesium, PDB code: 5mru was solved by W.Hinrichs, G.J.Palm, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.65 / 2.55
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 65.669, 65.669, 98.556, 90.00, 90.00, 90.00
R / Rfree (%) 22.8 / 27.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Tetr(Class A) in Complex with 5A,6-Anhydrotetracycline and Magnesium (pdb code 5mru). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Tetr(Class A) in Complex with 5A,6-Anhydrotetracycline and Magnesium, PDB code: 5mru:

Magnesium binding site 1 out of 1 in 5mru

Go back to Magnesium Binding Sites List in 5mru
Magnesium binding site 1 out of 1 in the Tetr(Class A) in Complex with 5A,6-Anhydrotetracycline and Magnesium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Tetr(Class A) in Complex with 5A,6-Anhydrotetracycline and Magnesium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:51.6
occ:1.00
O11 A:TDC301 1.9 57.6 1.0
O A:HOH402 2.0 43.1 1.0
NE2 A:HIS100 2.3 39.7 1.0
O12 A:TDC301 2.4 47.8 1.0
O A:HOH407 2.4 53.3 1.0
O A:HOH401 2.8 29.5 1.0
CE1 A:HIS100 2.8 39.3 1.0
C11 A:TDC301 3.2 61.8 1.0
O A:THR103 3.2 53.7 1.0
CD2 A:HIS100 3.3 36.3 1.0
OG1 A:THR103 3.3 44.5 1.0
C12 A:TDC301 3.4 53.4 1.0
O10 A:TDC301 3.7 71.3 1.0
C1B A:TDC301 3.8 59.9 1.0
ND1 A:HIS100 3.8 36.8 1.0
C A:THR103 3.9 54.4 1.0
CG A:HIS100 4.1 33.3 1.0
O A:HIS100 4.2 31.0 1.0
C1A A:TDC301 4.2 68.2 1.0
C10 A:TDC301 4.4 71.6 1.0
CB A:THR103 4.5 45.4 1.0
CA A:THR103 4.6 47.4 1.0
N A:ARG104 4.7 63.9 1.0
CD A:PRO105 4.7 77.7 1.0
N A:THR103 4.7 42.0 1.0
O1 A:TDC301 4.7 57.2 1.0
C1C A:TDC301 4.7 53.5 1.0
CA A:ARG104 4.8 72.9 1.0
N A:PRO105 4.9 76.4 1.0

Reference:

W.Hinrichs, G.J.Palm. Tetr(Class A) in Complex with 5A,6-Anhydrotetracycline and Magnesium To Be Published.
Page generated: Mon Dec 14 20:54:17 2020

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