Magnesium in PDB 5nyz: Twist and Induce: Dissecting the Link Between the Enzymatic Activity and the Sapi Inducing Capacity of the Phage 80 Dutpase. D95E Mutant From Dutpase 80ALPHA Phage.

The structure of Twist and Induce: Dissecting the Link Between the Enzymatic Activity and the Sapi Inducing Capacity of the Phage 80 Dutpase. D95E Mutant From Dutpase 80ALPHA Phage., PDB code: 5nyz was solved by C.Alite, S.Humphrey, J.Donderis, E.Maiques, J.R.Ciges-Tomas, J.R.Penades, A.Marina, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	61.71 / 2.50
Space group	P 21 3
Cell size a, b, c (Å), α, β, γ (°)	87.270, 87.270, 87.270, 90.00, 90.00, 90.00
R / Rfree (%)	22.6 / 28.1

The binding sites of Magnesium atom in the Twist and Induce: Dissecting the Link Between the Enzymatic Activity and the Sapi Inducing Capacity of the Phage 80 Dutpase. D95E Mutant From Dutpase 80ALPHA Phage. (pdb code 5nyz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Twist and Induce: Dissecting the Link Between the Enzymatic Activity and the Sapi Inducing Capacity of the Phage 80 Dutpase. D95E Mutant From Dutpase 80ALPHA Phage., PDB code: 5nyz:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Twist and Induce: Dissecting the Link Between the Enzymatic Activity and the Sapi Inducing Capacity of the Phage 80 Dutpase. D95E Mutant From Dutpase 80ALPHA Phage.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Twist and Induce: Dissecting the Link Between the Enzymatic Activity and the Sapi Inducing Capacity of the Phage 80 Dutpase. D95E Mutant From Dutpase 80ALPHA Phage. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg202 b:87.1 occ:1.00 O2B A:DUP201 2.5 81.2 1.0 O2A A:DUP201 2.5 80.1 1.0 O1G A:DUP201 2.6 80.9 1.0 PB A:DUP201 3.9 79.5 1.0 PG A:DUP201 3.9 81.2 1.0 PA A:DUP201 4.0 79.7 1.0 O3B A:DUP201 4.4 82.9 1.0 O3G A:DUP201 4.4 80.1 1.0 N3A A:DUP201 4.5 79.3 1.0 O1A A:DUP201 4.7 80.5 1.0

Magnesium binding site 2 out of 2 in the Twist and Induce: Dissecting the Link Between the Enzymatic Activity and the Sapi Inducing Capacity of the Phage 80 Dutpase. D95E Mutant From Dutpase 80ALPHA Phage.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Twist and Induce: Dissecting the Link Between the Enzymatic Activity and the Sapi Inducing Capacity of the Phage 80 Dutpase. D95E Mutant From Dutpase 80ALPHA Phage. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg203 b:62.4 occ:1.00 O A:HOH304 3.0 4.1 0.3 OE1 A:GLU95 3.0 46.8 1.0 O A:HOH312 3.4 0.4 0.3 CD A:GLU95 4.0 47.2 1.0 OE2 A:GLU95 4.3 49.9 1.0 NE2 A:GLN40 4.5 42.5 1.0 O A:GLU95 4.8 42.3 1.0 OE1 A:GLN40 4.9 40.4 1.0

C.Alite, S.Humphrey, J.Donderis, E.Maiques, J.R.Ciges-Tomas, J.R.Penades, A.Marina. Dissecting the Link Between the Enzymatic Activity and the Sapi Inducing Capacity of the Phage 80 Alpha Dutpase. Sci Rep V. 7 11234 2017.
ISSN: ESSN 2045-2322
PubMed: 28894239
DOI: 10.1038/S41598-017-11234-9