Magnesium in PDB 5o5w: Molybdenum Storage Protein Room-Temperature Structure Determined By Serial Millisecond Crystallography

The structure of Molybdenum Storage Protein Room-Temperature Structure Determined By Serial Millisecond Crystallography, PDB code: 5o5w was solved by B.Steffen, T.Weinert, U.Ermler, J.Standfuss, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.20 / 1.70
Space group	P 63 2 2
Cell size a, b, c (Å), α, β, γ (°)	117.350, 117.350, 233.350, 90.00, 90.00, 120.00
R / Rfree (%)	18 / 20.1

The structure of Molybdenum Storage Protein Room-Temperature Structure Determined By Serial Millisecond Crystallography also contains other interesting chemical elements:

Molybdenum

(Mo)

39 atoms

The binding sites of Magnesium atom in the Molybdenum Storage Protein Room-Temperature Structure Determined By Serial Millisecond Crystallography (pdb code 5o5w). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Molybdenum Storage Protein Room-Temperature Structure Determined By Serial Millisecond Crystallography, PDB code: 5o5w:

Magnesium binding site 1 out of 1 in the Molybdenum Storage Protein Room-Temperature Structure Determined By Serial Millisecond Crystallography


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Molybdenum Storage Protein Room-Temperature Structure Determined By Serial Millisecond Crystallography within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:49.7 occ:1.00 O1B A:ATP301 2.0 37.0 1.0 O A:HOH407 2.0 38.3 1.0 O A:PRO227 2.1 40.9 1.0 O A:HOH406 2.2 49.0 1.0 OE2 A:GLU190 2.2 45.3 1.0 O2A A:ATP301 2.2 45.2 1.0 CD A:GLU190 2.9 69.0 1.0 OE1 A:GLU190 3.2 58.6 1.0 PB A:ATP301 3.2 38.0 1.0 C A:PRO227 3.3 41.6 1.0 PA A:ATP301 3.4 46.2 1.0 O3A A:ATP301 3.5 44.9 1.0 OD2 A:ASP171 3.9 39.2 1.0 NZ A:LYS45 4.0 36.3 1.0 O3G A:ATP301 4.0 35.3 1.0 O B:HOH428 4.1 46.7 1.0 O3B A:ATP301 4.1 38.0 1.0 CG A:GLU190 4.2 47.9 1.0 CA A:PRO227 4.2 39.9 1.0 OD1 A:ASP171 4.2 39.2 1.0 C5' A:ATP301 4.3 48.5 1.0 O2B A:ATP301 4.3 41.0 1.0 N A:VAL228 4.3 37.5 1.0 O5' A:ATP301 4.4 53.2 1.0 O1A A:ATP301 4.4 51.6 1.0 CA A:VAL228 4.5 38.1 1.0 CG A:ASP171 4.5 37.6 1.0 CB A:PRO227 4.5 40.8 1.0 O A:HOH404 4.5 48.3 1.0 PG A:ATP301 4.6 35.5 1.0 O2G A:ATP301 4.8 34.7 1.0 O A:HOH454 5.0 44.5 1.0

T.Weinert, N.Olieric, R.Cheng, S.Brunle, D.James, D.Ozerov, D.Gashi, L.Vera, M.Marsh, K.Jaeger, F.Dworkowski, E.Panepucci, S.Basu, P.Skopintsev, A.S.Dore, T.Geng, R.M.Cooke, M.Liang, A.E.Prota, V.Panneels, P.Nogly, U.Ermler, G.Schertler, M.Hennig, M.O.Steinmetz, M.Wang, J.Standfuss. Serial Millisecond Crystallography For Routine Room-Temperature Structure Determination at Synchrotrons. Nat Commun V. 8 542 2017.
ISSN: ESSN 2041-1723
PubMed: 28912485
DOI: 10.1038/S41467-017-00630-4