Magnesium in PDB 5ocu: Molecular Basis of Human Kinesin-8 Function and Inhibition

Other elements in 5ocu:

The structure of Molecular Basis of Human Kinesin-8 Function and Inhibition also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Molecular Basis of Human Kinesin-8 Function and Inhibition (pdb code 5ocu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Molecular Basis of Human Kinesin-8 Function and Inhibition, PDB code: 5ocu:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 5ocu

Go back to Magnesium Binding Sites List in 5ocu
Magnesium binding site 1 out of 2 in the Molecular Basis of Human Kinesin-8 Function and Inhibition


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Molecular Basis of Human Kinesin-8 Function and Inhibition within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg500

b:7.4
occ:1.00
O2G K:ANP501 1.8 6.3 1.0
O2B K:ANP501 1.8 6.2 1.0
PG K:ANP501 2.2 6.8 1.0
N3B K:ANP501 2.4 6.6 1.0
PB K:ANP501 2.5 6.8 1.0
O3G K:ANP501 2.6 6.4 1.0
O3A K:ANP501 3.5 6.8 1.0
O1G K:ANP501 3.5 6.4 1.0
O2A K:ANP501 3.6 7.1 1.0
O1B K:ANP501 3.8 6.5 1.0
PA K:ANP501 4.0 7.3 1.0
O1A K:ANP501 4.3 7.3 1.0
N K:SER226 4.4 0.0 1.0
N K:THR120 4.6 0.0 1.0
O K:LEU259 4.8 0.0 1.0
N K:GLY261 4.9 0.0 1.0
CA K:SER226 4.9 0.0 1.0

Magnesium binding site 2 out of 2 in 5ocu

Go back to Magnesium Binding Sites List in 5ocu
Magnesium binding site 2 out of 2 in the Molecular Basis of Human Kinesin-8 Function and Inhibition


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Molecular Basis of Human Kinesin-8 Function and Inhibition within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:18.6
occ:1.00
O2G A:GTP503 2.4 28.7 1.0
O2B A:GTP503 3.2 41.2 1.0
PG A:GTP503 3.7 30.0 1.0
O3B A:GTP503 3.7 35.2 1.0
N A:GLN11 3.8 25.1 1.0
PB A:GTP503 3.8 41.4 1.0
CA A:GLN11 3.9 23.8 1.0
O3A A:GTP503 4.1 39.2 1.0
O1A A:GTP503 4.4 44.5 1.0
O1G A:GTP503 4.5 35.0 1.0
PA A:GTP503 4.8 41.3 1.0
O3G A:GTP503 4.9 32.1 1.0
C A:GLY10 5.0 28.3 1.0

Reference:

J.Locke, A.P.Joseph, A.Pena, M.M.Mockel, T.U.Mayer, M.Topf, C.A.Moores. Structural Basis of Human Kinesin-8 Function and Inhibition. Proc. Natl. Acad. Sci. V. 114 E9539 2017U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29078367
DOI: 10.1073/PNAS.1712169114
Page generated: Mon Dec 14 20:59:26 2020

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