Magnesium in PDB 5odj: Single-Stranded Dna-Binding Protein From Bacteriophage ENC34

The structure of Single-Stranded Dna-Binding Protein From Bacteriophage ENC34, PDB code: 5odj was solved by E.Cernooka, J.Rumnieks, A.Kazaks, K.Tars, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.78 / 1.50
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	38.080, 67.200, 76.830, 90.00, 90.00, 90.00
R / Rfree (%)	15.7 / 19.3

The structure of Single-Stranded Dna-Binding Protein From Bacteriophage ENC34 also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Magnesium atom in the Single-Stranded Dna-Binding Protein From Bacteriophage ENC34 (pdb code 5odj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Single-Stranded Dna-Binding Protein From Bacteriophage ENC34, PDB code: 5odj:

Magnesium binding site 1 out of 1 in the Single-Stranded Dna-Binding Protein From Bacteriophage ENC34


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Single-Stranded Dna-Binding Protein From Bacteriophage ENC34 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:29.0 occ:1.00 O A:LYS11 2.4 27.5 1.0 O A:HOH403 2.9 23.3 1.0 N A:ILE61 3.1 19.5 1.0 C A:LYS11 3.3 21.9 1.0 CA A:HIS58 3.4 20.5 1.0 N A:ALA60 3.5 20.2 1.0 O A:THR57 3.5 26.7 1.0 C A:HIS58 3.5 19.4 1.0 CG2 A:ILE61 3.6 18.1 1.0 CB A:ALA60 3.6 22.8 1.0 O A:HIS58 3.8 18.5 1.0 CB A:ILE61 3.8 17.4 1.0 CA A:ALA60 3.8 20.9 1.0 CB A:ASN12 3.8 19.0 1.0 CB A:LYS11 3.9 21.7 1.0 C A:ALA60 3.9 20.0 1.0 N A:GLY59 3.9 20.2 1.0 CA A:ILE61 4.1 18.7 1.0 CA A:LYS11 4.1 22.9 1.0 N A:ASN12 4.2 20.6 1.0 CG A:LYS11 4.2 18.6 1.0 N A:HIS58 4.2 19.6 1.0 C A:THR57 4.3 21.8 1.0 CB A:HIS58 4.3 18.2 1.0 C A:GLY59 4.4 19.8 1.0 CA A:ASN12 4.4 18.9 1.0 ND2 A:ASN12 4.5 24.0 1.0 N A:LYS11 4.5 24.0 1.0 CG A:HIS58 4.7 18.2 1.0 CG A:ASN12 4.7 19.9 1.0 C A:ASN12 4.7 16.1 1.0 CA A:GLY59 4.7 21.7 1.0 CG2 A:VAL10 4.8 21.1 1.0 O A:HOH462 4.8 31.2 1.0

E.Cernooka, J.Rumnieks, K.Tars, A.Kazaks. Structural Basis For Dna Recognition of A Single-Stranded Dna-Binding Protein From Enterobacter Phage ENC34. Sci Rep V. 7 15529 2017.
ISSN: ESSN 2045-2322
PubMed: 29138440
DOI: 10.1038/S41598-017-15774-Y