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Magnesium in PDB 5oet: The Structure of A Glutathione Synthetase Like-Effector (GSS30) From Globodera Pallida in Apoform.

Enzymatic activity of The Structure of A Glutathione Synthetase Like-Effector (GSS30) From Globodera Pallida in Apoform.

All present enzymatic activity of The Structure of A Glutathione Synthetase Like-Effector (GSS30) From Globodera Pallida in Apoform.:
6.3.2.3;

Protein crystallography data

The structure of The Structure of A Glutathione Synthetase Like-Effector (GSS30) From Globodera Pallida in Apoform., PDB code: 5oet was solved by C.J.Lilley, A.Maqbool, D.Wu, H.B.Yusup, L.M.Jones, P.R.J.Birch, M.J.Banfield, P.E.Urwin, S.Eves-Van Den Akker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.57
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 72.750, 81.619, 93.840, 90.00, 103.18, 90.00
R / Rfree (%) 25.1 / 28.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of A Glutathione Synthetase Like-Effector (GSS30) From Globodera Pallida in Apoform. (pdb code 5oet). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Structure of A Glutathione Synthetase Like-Effector (GSS30) From Globodera Pallida in Apoform., PDB code: 5oet:

Magnesium binding site 1 out of 1 in 5oet

Go back to Magnesium Binding Sites List in 5oet
Magnesium binding site 1 out of 1 in the The Structure of A Glutathione Synthetase Like-Effector (GSS30) From Globodera Pallida in Apoform.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of A Glutathione Synthetase Like-Effector (GSS30) From Globodera Pallida in Apoform. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg601

b:15.3
occ:0.50
 OE2 B:GLU426 1.9 81.0 1.0
NE2 B:HIS406 2.1 88.0 1.0
CD B:GLU426 2.8 82.5 1.0
OE1 B:GLU426 2.9 79.8 1.0
CD2 B:HIS406 3.0 87.3 1.0
CE1 B:HIS406 3.1 88.1 1.0
CG B:HIS406 4.2 85.1 1.0
ND1 B:HIS406 4.2 84.9 1.0
CG B:GLU426 4.2 83.9 1.0
CG B:PRO405 4.6 90.0 1.0

Reference:

C.J.Lilley, A.Maqbool, D.Wu, H.B.Yusup, L.M.Jones, P.R.J.Birch, M.J.Banfield, P.E.Urwin, S.Eves-Van Den Akker. Effector Gene Birth in Plant Parasitic Nematodes: Neofunctionalization of A Housekeeping Glutathione Synthetase Gene. Plos Genet. V. 14 07310 2018.
ISSN: ESSN 1553-7404
PubMed: 29641602
DOI: 10.1371/JOURNAL.PGEN.1007310
Page generated: Mon Dec 14 20:59:41 2020

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