Atomistry » Magnesium » PDB 5s60-5scf » 5sa1
Atomistry »
  Magnesium »
    PDB 5s60-5scf »
      5sa1 »

Magnesium in PDB 5sa1: Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944

Enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944

All present enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944:
1.8.1.12;

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944, PDB code: 5sa1 was solved by A.Fiorillo, A.Ilari, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.09 / 1.84
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 80.06, 109.06, 112.05, 90, 90, 90
R / Rfree (%) 19.2 / 23.2

Other elements in 5sa1:

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944 also contains other interesting chemical elements:

Bromine (Br) 1 atom
Fluorine (F) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944 (pdb code 5sa1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944, PDB code: 5sa1:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 5sa1

Go back to Magnesium Binding Sites List in 5sa1
Magnesium binding site 1 out of 2 in the Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg510

b:69.6
occ:0.50
 O A:HOH636 1.4 51.2 1.0
O A:PHE114 2.1 48.3 0.5
O A:HOH825 2.1 48.2 1.0
O A:THR117 2.4 48.6 0.5
O A:HOH601 2.5 52.8 1.0
O A:LEU120 2.8 50.7 0.5
C A:PHE114 3.3 47.2 0.5
C A:THR117 3.5 53.6 0.5
O A:ASN115 3.5 52.7 0.5
C A:ASN115 3.8 51.7 0.5
C A:LEU120 3.8 50.4 0.5
CA A:ASN115 3.9 50.8 0.5
N A:ASN115 4.0 50.1 0.5
N A:THR117 4.1 54.5 0.5
OD2 A:ASP121 4.2 52.7 0.5
N A:LEU120 4.3 55.5 0.5
CA A:THR117 4.3 54.7 0.5
N A:GLU118 4.4 55.3 0.5
CA A:PHE114 4.4 45.0 0.5
CA A:LEU120 4.5 52.4 0.5
CA A:GLU118 4.5 56.8 0.5
O A:HOH792 4.6 48.0 1.0
CB A:LEU120 4.6 50.5 0.5
N A:ASP116 4.6 50.4 1.0
N A:GLY119 4.7 52.9 1.0
C A:ASP116 4.8 53.6 1.0
N A:ASP121 4.8 50.1 0.5
CG A:ASP121 4.8 54.8 0.5
C A:GLU118 4.8 55.5 0.5
CB A:THR117 4.9 55.0 0.5
CA A:ASP121 4.9 51.5 0.5

Magnesium binding site 2 out of 2 in 5sa1

Go back to Magnesium Binding Sites List in 5sa1
Magnesium binding site 2 out of 2 in the Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Pandda Analysis Group Deposition -- Crystal Structure of Trypanosoma Brucei Trypanothione Reductase in Complex with Z2856434944 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg507

b:45.9
occ:1.00
 O B:HOH602 1.9 43.6 1.0
O B:THR117 2.1 48.1 1.0
O B:PHE114 2.2 53.6 1.0
O B:HOH729 2.4 53.1 1.0
O B:LEU120 2.4 49.8 1.0
C B:THR117 3.1 61.7 1.0
C B:PHE114 3.4 53.3 1.0
C B:LEU120 3.5 45.2 1.0
N B:LEU120 3.9 52.6 1.0
N B:THR117 3.9 63.9 1.0
N B:GLU118 3.9 54.4 1.0
CA B:THR117 3.9 57.2 1.0
CA B:GLU118 4.1 60.2 1.0
CA B:LEU120 4.1 50.0 1.0
O B:ASN115 4.1 79.0 1.0
CA B:PHE114 4.2 51.4 1.0
C B:ASN115 4.3 67.7 1.0
N B:GLY119 4.3 54.1 1.0
CB B:THR117 4.3 60.2 1.0
CB B:LEU120 4.3 52.7 1.0
C B:GLU118 4.4 55.8 1.0
N B:ASN115 4.4 58.3 1.0
N B:ASP121 4.5 43.1 1.0
CA B:ASN115 4.6 65.0 1.0
OD1 B:ASP121 4.7 49.6 1.0
CA B:ASP121 4.7 40.0 1.0
N B:ASP116 4.8 57.0 1.0
O B:MET113 4.9 44.8 1.0
C B:ASP116 5.0 64.0 1.0

Reference:

A.Fiorillo, A.Ilari. Pandda Analysis Group Deposition To Be Published.
Page generated: Mon Sep 30 03:01:33 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy