Magnesium in PDB 5t2v: Crystal Structure of MSMEG_6753 A Putative Betaketoacyl-Acp Reductase

Protein crystallography data

The structure of Crystal Structure of MSMEG_6753 A Putative Betaketoacyl-Acp Reductase, PDB code: 5t2v was solved by M.Blaise, N.Van Wyk, F.Baneres-Roquet, Y.Guerardel, L.Kremer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.90 / 1.90
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 73.930, 75.500, 77.260, 90.00, 90.00, 90.00
R / Rfree (%) 16.1 / 19.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of MSMEG_6753 A Putative Betaketoacyl-Acp Reductase (pdb code 5t2v). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of MSMEG_6753 A Putative Betaketoacyl-Acp Reductase, PDB code: 5t2v:

Magnesium binding site 1 out of 1 in 5t2v

Go back to Magnesium Binding Sites List in 5t2v
Magnesium binding site 1 out of 1 in the Crystal Structure of MSMEG_6753 A Putative Betaketoacyl-Acp Reductase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of MSMEG_6753 A Putative Betaketoacyl-Acp Reductase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:31.7
occ:0.31
O A:HOH407 2.1 42.0 1.0
O A:HOH563 2.3 40.8 1.0
O A:HOH499 2.5 38.9 1.0
O A:HOH444 3.8 35.6 1.0
OD2 A:ASP104 4.1 30.4 1.0
OD1 A:ASP104 4.2 32.5 1.0
O A:HOH537 4.2 45.5 1.0
O A:HOH477 4.4 46.2 1.0
CG A:ASP104 4.6 30.7 1.0
OE1 A:GLN100 4.7 49.2 1.0
CD A:GLN100 4.8 44.0 1.0
NH1 A:ARG108 5.0 29.7 1.0

Reference:

M.Blaise, N.Van Wyk, F.Baneres-Roquet, Y.Guerardel, L.Kremer. Binding of Nadp(+) Triggers An Open-to-Closed Transition in A Mycobacterial Fabg Beta-Ketoacyl-Acp Reductase. Biochem. J. V. 474 907 2017.
ISSN: ESSN 1470-8728
PubMed: 28126742
DOI: 10.1042/BCJ20161052
Page generated: Mon Dec 14 21:11:09 2020

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