Magnesium in PDB 5thx: Crystal Structure of A Ferredoxin Nadp+ Reductase From Neisseria Gonorrhoeae with Bound Nadp and Fad

Protein crystallography data

The structure of Crystal Structure of A Ferredoxin Nadp+ Reductase From Neisseria Gonorrhoeae with Bound Nadp and Fad, PDB code: 5thx was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.40 / 1.55
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 60.010, 60.010, 158.270, 90.00, 90.00, 90.00
R / Rfree (%) 15.9 / 18.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Ferredoxin Nadp+ Reductase From Neisseria Gonorrhoeae with Bound Nadp and Fad (pdb code 5thx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Ferredoxin Nadp+ Reductase From Neisseria Gonorrhoeae with Bound Nadp and Fad, PDB code: 5thx:

Magnesium binding site 1 out of 1 in 5thx

Go back to Magnesium Binding Sites List in 5thx
Magnesium binding site 1 out of 1 in the Crystal Structure of A Ferredoxin Nadp+ Reductase From Neisseria Gonorrhoeae with Bound Nadp and Fad


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Ferredoxin Nadp+ Reductase From Neisseria Gonorrhoeae with Bound Nadp and Fad within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:26.1
occ:1.00
NH2 A:ARG26 3.3 23.8 1.0
O A:HOH668 3.3 30.6 1.0
N A:PHE32 3.4 20.4 1.0
CA A:ARG31 3.5 22.6 1.0
CB A:ARG31 3.6 24.2 1.0
CB A:ASN59 3.6 21.8 1.0
O A:PHE32 3.7 22.9 1.0
CG A:ARG31 3.9 25.6 1.0
C A:ARG31 4.0 21.5 1.0
O A:ASN59 4.0 23.8 1.0
ND2 A:ASN59 4.1 23.2 1.0
CG A:ASN59 4.2 23.3 1.0
C A:PHE32 4.5 20.9 1.0
CA A:PHE32 4.6 19.3 1.0
CZ A:ARG26 4.6 27.4 1.0
CA A:ASN59 4.6 19.9 1.0
C A:ASN59 4.6 21.9 1.0
O A:LEU30 4.7 32.4 1.0
N A:ARG31 4.7 26.2 1.0
CD A:ARG31 4.8 32.3 1.0
CD1 A:PHE32 5.0 18.8 1.0

Reference:

J.N.Phan, D.M.Dranow, S.J.Mayclin, D.D.Lorimer, T.E.Edwards. Crystal Structure of A Ferredoxin Nadp+ Reductase From Neisseria Gonorrhoeae with Bound Nadp and Fad To Be Published.
Page generated: Mon Dec 14 21:12:08 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy