Magnesium in PDB 5tw7: Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae

All present enzymatic activity of Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae:
6.3.5.2;

The structure of Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae, PDB code: 5tw7 was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.12 / 2.35
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	108.390, 109.350, 109.910, 115.33, 100.00, 108.06
R / Rfree (%)	18.6 / 22.3

The binding sites of Magnesium atom in the Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae (pdb code 5tw7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae, PDB code: 5tw7:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg601 b:48.9 occ:1.00 O E:ILE503 2.2 56.5 1.0 O E:ILE497 2.3 34.7 1.0 O E:HOH818 2.3 57.7 1.0 O E:VAL500 2.6 43.8 1.0 O E:HOH809 2.6 33.2 1.0 C E:ILE503 3.3 41.0 1.0 C E:ILE497 3.4 36.5 1.0 C E:VAL500 3.6 42.7 1.0 N E:ILE503 3.8 44.4 1.0 CA E:ILE497 4.0 39.4 1.0 CA E:ILE503 4.1 42.9 1.0 N E:GLY502 4.1 48.3 1.0 N E:ASN504 4.3 41.0 1.0 O E:ILE496 4.3 44.2 1.0 CA E:LYS501 4.3 46.6 1.0 N E:LYS501 4.4 44.9 1.0 CA E:ASN504 4.4 41.5 1.0 N E:VAL500 4.5 43.6 1.0 CG2 E:ILE497 4.5 39.2 1.0 N E:ASN498 4.5 38.9 1.0 CA E:VAL500 4.6 41.5 1.0 C E:LYS501 4.7 48.8 1.0 CB E:ASN504 4.7 44.3 1.0 CB E:ILE503 4.7 34.9 1.0 OD2 E:ASP463 4.8 61.8 1.0 O E:ASN498 4.8 51.9 1.0 C E:ASN498 4.8 50.2 1.0 C E:GLY502 4.8 42.6 1.0 CA E:ASN498 4.8 48.4 1.0 CB E:ILE497 4.9 37.8 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg601 b:68.2 occ:1.00 O F:ILE503 2.3 39.4 1.0 O F:HOH796 2.4 46.4 1.0 O F:HOH851 2.5 52.4 1.0 O F:ILE497 2.5 38.1 1.0 O F:VAL500 2.7 37.8 1.0 C F:ILE503 3.4 38.8 1.0 C F:ILE497 3.6 43.4 1.0 C F:VAL500 3.7 46.4 1.0 N F:ILE503 3.9 38.8 1.0 N F:GLY502 4.0 48.1 1.0 CA F:ILE497 4.1 38.1 1.0 CA F:LYS501 4.2 47.8 1.0 CA F:ILE503 4.2 40.2 1.0 N F:ASN504 4.3 35.5 1.0 N F:LYS501 4.3 50.9 1.0 CA F:ASN504 4.4 39.9 1.0 CG2 F:ILE497 4.5 36.3 1.0 O F:ILE496 4.5 45.9 1.0 C F:LYS501 4.6 45.0 1.0 N F:VAL500 4.7 46.0 1.0 CB F:ASN504 4.7 41.8 1.0 N F:ASN498 4.7 41.3 1.0 CA F:VAL500 4.8 41.3 1.0 C F:GLY502 4.8 44.7 1.0 CB F:ILE503 4.9 42.3 1.0 CB F:ILE497 4.9 39.7 1.0 OD2 F:ASP463 4.9 65.1 1.0 CA F:GLY502 5.0 48.2 1.0 O F:ASN498 5.0 50.2 1.0 C F:ASN498 5.0 48.4 1.0

T.E.Edwards, J.Abendroth, D.Lorimer, J.W.Fairman, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of A Gmp Synthase (Glutamine-Hydrolyzing) From Neisseria Gonorrhoeae To Be Published.