Magnesium in PDB 5u9l: Crystal Structure of the Intermembrane Space Region of the Plastid Division Protein PARC6

The structure of Crystal Structure of the Intermembrane Space Region of the Plastid Division Protein PARC6, PDB code: 5u9l was solved by J.D.Delmar, T.H.Chou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.91 / 2.52
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	44.533, 124.546, 130.046, 90.00, 90.00, 90.00
R / Rfree (%)	18.1 / 25.9

The binding sites of Magnesium atom in the Crystal Structure of the Intermembrane Space Region of the Plastid Division Protein PARC6 (pdb code 5u9l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the Intermembrane Space Region of the Plastid Division Protein PARC6, PDB code: 5u9l:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of the Intermembrane Space Region of the Plastid Division Protein PARC6


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Intermembrane Space Region of the Plastid Division Protein PARC6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg901 b:64.7 occ:1.00 OE2 A:GLU701 3.1 79.0 1.0 OH A:TYR798 3.2 56.0 1.0 NZ A:LYS704 3.3 66.1 1.0 OE1 A:GLU701 3.5 62.1 1.0 OH A:TYR794 3.5 61.0 1.0 NE1 A:TRP700 3.5 52.0 1.0 CD A:GLU701 3.7 66.8 1.0 O A:HOH1013 3.8 61.4 1.0 CD1 A:ILE796 4.3 51.3 1.0 CZ A:TYR798 4.3 56.4 1.0 CE2 A:TRP700 4.4 42.0 1.0 CD1 A:TRP700 4.4 45.5 1.0 O A:HOH1008 4.4 53.5 1.0 CD A:LYS704 4.5 47.7 1.0 CE1 A:TYR798 4.5 54.9 1.0 CE A:LYS704 4.5 59.3 1.0 CD2 A:LEU773 4.6 56.0 1.0 CZ A:TYR794 4.6 64.2 1.0 CZ2 A:TRP700 4.6 43.0 1.0 CE1 A:TYR794 4.8 66.2 1.0 CZ2 A:TRP729 4.9 53.0 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of the Intermembrane Space Region of the Plastid Division Protein PARC6


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of the Intermembrane Space Region of the Plastid Division Protein PARC6 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg901 b:59.2 occ:1.00 O B:HOH1019 3.0 44.6 1.0 OH B:TYR798 3.1 64.1 1.0 NE1 B:TRP700 3.2 38.3 1.0 OE1 B:GLU701 3.8 67.9 1.0 NZ B:LYS704 3.9 59.6 1.0 CE2 B:TRP700 3.9 33.4 1.0 CZ2 B:TRP700 4.1 35.1 1.0 CZ B:TYR798 4.1 55.2 1.0 CD1 B:ILE796 4.1 52.0 1.0 OH B:TYR794 4.1 56.9 1.0 CE1 B:TYR798 4.2 52.7 1.0 CZ2 B:TRP729 4.2 44.1 1.0 CD1 B:TRP700 4.3 37.9 1.0 CD B:LYS704 4.5 43.5 1.0 CD B:GLU701 4.8 57.1 1.0 O B:HOH1007 4.8 54.1 1.0 O B:GLY644 4.8 65.4 1.0 CE B:LYS704 4.8 54.0 1.0 CH2 B:TRP729 4.8 45.6 1.0 CE2 B:TRP729 4.9 51.7 1.0 OE2 B:GLU701 4.9 50.4 1.0

J.A.Delmar, E.W.Yu, K.W.Osteryoung. Cocrystal Structure of the Intermembrane Space Region of the Plastid Division Proteins PARC6 and PDV1 To Be Published.