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Magnesium in PDB 5ux9: The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114

Enzymatic activity of The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114

All present enzymatic activity of The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114:
2.3.1.28;

Protein crystallography data

The structure of The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114, PDB code: 5ux9 was solved by K.Tan, M.Zhou, W.F.Anderson, A.Joachimiak, Center For Structural Genomicsof Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.05 / 2.70
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 147.426, 147.426, 101.211, 90.00, 90.00, 120.00
R / Rfree (%) 20 / 24

Other elements in 5ux9:

The structure of The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114 also contains other interesting chemical elements:

Chlorine (Cl) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114 (pdb code 5ux9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114, PDB code: 5ux9:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in 5ux9

Go back to Magnesium Binding Sites List in 5ux9
Magnesium binding site 1 out of 4 in the The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:79.0
occ:1.00
 O A:HOH418 2.1 96.7 1.0
O A:HOH402 2.1 97.2 1.0
ND1 A:HIS204 2.2 94.7 1.0
OE1 A:GLU207 2.3 82.9 1.0
CE1 A:HIS204 2.9 88.5 1.0
CD A:GLU207 3.3 77.8 1.0
CG A:HIS204 3.3 78.7 1.0
OE2 A:GLU207 3.5 80.8 1.0
CB A:HIS204 3.9 62.8 1.0
NE2 A:HIS204 4.0 89.2 1.0
OG A:SER202 4.1 44.8 1.0
CD2 A:HIS204 4.3 87.1 1.0
CB A:SER202 4.6 45.7 1.0
CG A:GLU207 4.6 70.1 1.0
O A:GLU198 4.8 52.0 1.0
CG1 A:ILE199 4.9 49.1 1.0
CA A:ILE199 5.0 44.9 1.0

Magnesium binding site 2 out of 4 in 5ux9

Go back to Magnesium Binding Sites List in 5ux9
Magnesium binding site 2 out of 4 in the The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg302

b:71.8
occ:1.00
 O B:HOH411 2.1 75.3 1.0
ND1 B:HIS204 2.2 63.0 1.0
OE1 B:GLU207 2.6 80.5 1.0
CE1 B:HIS204 2.6 59.5 1.0
OE2 B:GLU207 2.7 75.0 1.0
CD B:GLU207 3.0 75.1 1.0
CG B:HIS204 3.2 57.5 1.0
NE2 B:HIS204 3.7 59.5 1.0
CB B:HIS204 3.9 53.1 1.0
CD2 B:HIS204 4.0 59.0 1.0
CG B:GLU207 4.5 70.2 1.0
OG B:SER202 4.6 47.6 1.0

Magnesium binding site 3 out of 4 in 5ux9

Go back to Magnesium Binding Sites List in 5ux9
Magnesium binding site 3 out of 4 in the The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg303

b:51.6
occ:1.00
 O C:HOH406 2.0 64.1 1.0
ND1 C:HIS204 2.0 80.1 1.0
O C:HOH416 2.1 41.5 1.0
OE2 C:GLU207 2.5 74.8 1.0
OE1 C:GLU207 2.5 81.9 1.0
CE1 C:HIS204 2.8 82.3 1.0
O C:HOH419 2.8 35.1 1.0
CD C:GLU207 2.8 76.6 1.0
O C:HOH422 3.0 43.3 1.0
CG C:HIS204 3.1 74.6 1.0
CB C:HIS204 3.7 67.1 1.0
NE2 C:HIS204 3.9 80.2 1.0
CD2 C:HIS204 4.1 75.8 1.0
CG C:GLU207 4.3 71.7 1.0
OG C:SER202 4.3 57.3 1.0
CG2 C:ILE199 4.9 55.7 1.0
CB C:SER202 5.0 58.3 1.0
CB C:GLU207 5.0 64.5 1.0

Magnesium binding site 4 out of 4 in 5ux9

Go back to Magnesium Binding Sites List in 5ux9
Magnesium binding site 4 out of 4 in the The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg303

b:86.6
occ:1.00
 O D:HOH427 2.0 76.0 1.0
OE1 D:GLU207 2.3 65.3 1.0
CD2 D:HIS204 2.4 46.8 1.0
CD D:GLU207 2.9 60.4 1.0
OE2 D:GLU207 3.0 63.0 1.0
NE2 D:HIS204 3.4 48.2 1.0
CG D:HIS204 3.4 46.5 1.0
CB D:HIS204 3.9 46.4 1.0
OG D:SER202 4.3 37.0 1.0
CG D:GLU207 4.3 52.8 1.0
CE1 D:HIS204 4.5 48.2 1.0
ND1 D:HIS204 4.5 47.4 1.0
CG1 D:ILE199 4.9 35.2 1.0
CB D:GLU207 4.9 44.9 1.0
CG2 D:ILE199 5.0 36.8 1.0

Reference:

K.Tan, M.Zhou, W.F.Anderson, A.Joachimiak. The Crystal Structure of Chloramphenicol Acetyltransferase From Vibrio Fischeri ES114 To Be Published.
Page generated: Mon Sep 30 05:56:39 2024

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