Atomistry » Magnesium » PDB 5vw9-5w4u » 5w15
Atomistry »
  Magnesium »
    PDB 5vw9-5w4u »
      5w15 »

Magnesium in PDB 5w15: Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria.

Protein crystallography data

The structure of Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria., PDB code: 5w15 was solved by Ssgcid, Seattle Structural Genomics Center For Infectious Disease(Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 60.070, 143.590, 75.850, 90.00, 111.34, 90.00
R / Rfree (%) 16.6 / 18.8

Other elements in 5w15:

The structure of Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria. also contains other interesting chemical elements:

Chlorine (Cl) 8 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria. (pdb code 5w15). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria., PDB code: 5w15:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 5w15

Go back to Magnesium Binding Sites List in 5w15
Magnesium binding site 1 out of 2 in the Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg301

b:18.1
occ:1.00
OH C:TYR149 2.9 23.9 1.0
CZ C:TYR149 3.7 22.8 1.0
CE2 C:TYR149 3.7 22.7 1.0
CE1 C:TYR149 4.9 21.9 1.0
CD2 C:TYR149 4.9 21.8 1.0

Magnesium binding site 2 out of 2 in 5w15

Go back to Magnesium Binding Sites List in 5w15
Magnesium binding site 2 out of 2 in the Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria. within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg301

b:14.7
occ:1.00
O C:HOH563 3.1 23.3 1.0
O D:HOH675 3.1 21.9 1.0
NE2 D:GLN231 3.3 16.3 1.0
NH1 C:ARG90 3.3 17.7 1.0
NH1 D:ARG244 3.4 19.2 1.0
CD C:ARG90 3.7 16.9 1.0
CD D:ARG244 3.8 17.2 1.0
CG D:GLN231 3.8 16.5 1.0
CB C:ALA113 3.9 17.0 1.0
CD D:GLN231 4.0 16.4 1.0
CG C:ARG90 4.1 15.8 1.0
CD2 D:LEU242 4.3 15.3 1.0
CZ C:ARG90 4.3 18.0 1.0
CZ D:ARG244 4.4 19.4 1.0
NE C:ARG90 4.4 17.6 1.0
O D:HOH660 4.5 25.4 1.0
NE D:ARG244 4.5 17.9 1.0
CG D:ARG244 4.9 17.3 1.0
O D:HOH728 4.9 25.2 1.0
CB D:GLN231 4.9 16.7 1.0
O C:TYR114 5.0 17.4 1.0

Reference:

R.M.Irwin, S.J.Mayclin, D.Lorimer, T.E.Edwards. Crystal Structure of An Alpha/Beta Hydrolase Fold Protein From Burkholderia Ambifaria. To Be Published.
Page generated: Mon Sep 30 06:25:29 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy