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Magnesium in PDB 5wud: Structural Basis For Conductance Through Tric Cation Channels

Protein crystallography data

The structure of Structural Basis For Conductance Through Tric Cation Channels, PDB code: 5wud was solved by M.Su, F.Gao, Y.Mao, D.L.Li, Y.Z.Guo, X.H.Wang, R.Bruni, B.Kloss, W.A.Hendrickson, Y.H.Chen, New York Consortium On Membrane Proteinstructure (Nycomps), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.03 / 1.90
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 64.613, 64.613, 80.955, 90.00, 90.00, 120.00
R / Rfree (%) 18.7 / 22

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structural Basis For Conductance Through Tric Cation Channels (pdb code 5wud). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structural Basis For Conductance Through Tric Cation Channels, PDB code: 5wud:

Magnesium binding site 1 out of 1 in 5wud

Go back to Magnesium Binding Sites List in 5wud
Magnesium binding site 1 out of 1 in the Structural Basis For Conductance Through Tric Cation Channels


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structural Basis For Conductance Through Tric Cation Channels within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:21.5
occ:0.33
O A:HOH411 2.2 13.5 1.0
OD1 A:ASN144 2.3 20.9 1.0
CG A:ASN144 3.5 20.6 1.0
O A:HOH433 3.9 17.9 1.0
CA A:ASN144 4.0 16.7 1.0
CB A:ASN144 4.3 17.9 1.0
O A:ILE141 4.4 16.5 1.0
C A:ASN144 4.5 18.0 1.0
ND2 A:ASN144 4.5 19.4 1.0
N A:GLU145 4.8 18.3 0.5
N A:GLU145 4.9 18.3 0.5
O A:ASN144 4.9 18.1 1.0

Reference:

M.Su, F.Gao, Q.Yuan, Y.Mao, D.L.Li, Y.Guo, C.Yang, X.H.Wang, R.Bruni, B.Kloss, H.Zhao, Y.Zeng, F.B.Zhang, A.R.Marks, W.A.Hendrickson, Y.H.Chen. Structural Basis For Conductance Through Tric Cation Channels. Nat Commun V. 8 15103 2017.
ISSN: ESSN 2041-1723
PubMed: 28524849
DOI: 10.1038/NCOMMS15103
Page generated: Mon Sep 30 08:56:22 2024

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