Magnesium in PDB 5wy5: Crystal Structure of MAGEG1 and NSE1 Complex

Protein crystallography data

The structure of Crystal Structure of MAGEG1 and NSE1 Complex, PDB code: 5wy5 was solved by M.Yang, J.Gao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.36 / 2.92
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 83.257, 154.327, 53.726, 90.00, 90.00, 90.00
R / Rfree (%) 21.6 / 27

Other elements in 5wy5:

The structure of Crystal Structure of MAGEG1 and NSE1 Complex also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of MAGEG1 and NSE1 Complex (pdb code 5wy5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of MAGEG1 and NSE1 Complex, PDB code: 5wy5:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 5wy5

Go back to Magnesium Binding Sites List in 5wy5
Magnesium binding site 1 out of 2 in the Crystal Structure of MAGEG1 and NSE1 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of MAGEG1 and NSE1 Complex within 5.0Å range:

Magnesium binding site 2 out of 2 in 5wy5

Go back to Magnesium Binding Sites List in 5wy5
Magnesium binding site 2 out of 2 in the Crystal Structure of MAGEG1 and NSE1 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of MAGEG1 and NSE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg302

b:96.9
occ:1.00
NH2 B:ARG203 2.8 0.4 1.0
NH1 B:ARG203 3.0 0.2 1.0
CZ B:ARG203 3.3 0.4 1.0
CH2 B:TRP199 4.1 0.8 1.0
NE B:ARG203 4.5 0.3 1.0
CZ2 B:TRP199 4.7 0.5 1.0

Reference:

J.M.Doyle, J.Gao, J.Wang, M.Yang, P.R.Potts. Mage-Ring Protein Complexes Comprise A Family of E3 Ubiquitin Ligases. Mol.Cell V. 39 963 2010.
ISSN: ISSN 1097-2765
PubMed: 20864041
DOI: 10.1016/J.MOLCEL.2010.08.029
Page generated: Mon Dec 14 21:25:46 2020

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