Magnesium in PDB 5xd6: CARK1 Phosphorylates Aba Receptors
Protein crystallography data
The structure of CARK1 Phosphorylates Aba Receptors, PDB code: 5xd6
was solved by
L.Zhang,
Z.Lou,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
29.76 /
1.90
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
69.715,
46.661,
110.512,
90.00,
105.77,
90.00
|
R / Rfree (%)
|
21.7 /
25.1
|
Magnesium Binding Sites:
The binding sites of Magnesium atom in the CARK1 Phosphorylates Aba Receptors
(pdb code 5xd6). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the
CARK1 Phosphorylates Aba Receptors, PDB code: 5xd6:
Jump to Magnesium binding site number:
1;
2;
Magnesium binding site 1 out
of 2 in 5xd6
Go back to
Magnesium Binding Sites List in 5xd6
Magnesium binding site 1 out
of 2 in the CARK1 Phosphorylates Aba Receptors
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of CARK1 Phosphorylates Aba Receptors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1001
b:26.6
occ:1.00
|
O1B
|
A:ANP1000
|
1.9
|
36.3
|
1.0
|
O
|
A:HOH1109
|
2.0
|
32.9
|
1.0
|
O
|
A:HOH1111
|
2.0
|
29.6
|
1.0
|
OD1
|
A:ASN204
|
2.0
|
18.7
|
1.0
|
O1A
|
A:ANP1000
|
2.1
|
27.4
|
1.0
|
O
|
A:HOH1161
|
2.1
|
23.4
|
1.0
|
CG
|
A:ASN204
|
3.1
|
23.1
|
1.0
|
PA
|
A:ANP1000
|
3.2
|
28.8
|
1.0
|
PB
|
A:ANP1000
|
3.2
|
36.7
|
1.0
|
O3A
|
A:ANP1000
|
3.5
|
30.1
|
1.0
|
ND2
|
A:ASN204
|
3.6
|
18.6
|
1.0
|
O3G
|
A:ANP1000
|
3.9
|
32.5
|
1.0
|
O5'
|
A:ANP1000
|
3.9
|
27.6
|
1.0
|
NZ
|
A:LYS97
|
4.2
|
21.3
|
1.0
|
O2B
|
A:ANP1000
|
4.2
|
33.1
|
1.0
|
O
|
A:SER203
|
4.2
|
26.7
|
1.0
|
N3B
|
A:ANP1000
|
4.3
|
36.1
|
1.0
|
OD2
|
A:ASP217
|
4.3
|
27.2
|
1.0
|
CB
|
A:ASN204
|
4.4
|
17.9
|
1.0
|
O2A
|
A:ANP1000
|
4.4
|
26.5
|
1.0
|
CB
|
A:ALA216
|
4.5
|
20.2
|
1.0
|
PG
|
A:ANP1000
|
4.5
|
42.7
|
1.0
|
O
|
A:ASP217
|
4.5
|
25.4
|
1.0
|
C8
|
A:ANP1000
|
4.6
|
24.2
|
1.0
|
CA
|
A:ASN204
|
4.6
|
19.0
|
1.0
|
OH
|
A:TYR80
|
4.7
|
32.8
|
1.0
|
O1G
|
A:ANP1000
|
4.8
|
33.8
|
1.0
|
C
|
A:SER203
|
4.9
|
26.1
|
1.0
|
CG
|
A:ASP217
|
5.0
|
26.7
|
1.0
|
N7
|
A:ANP1000
|
5.0
|
20.1
|
1.0
|
|
Magnesium binding site 2 out
of 2 in 5xd6
Go back to
Magnesium Binding Sites List in 5xd6
Magnesium binding site 2 out
of 2 in the CARK1 Phosphorylates Aba Receptors
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of CARK1 Phosphorylates Aba Receptors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1001
b:33.0
occ:1.00
|
O1B
|
B:ANP1000
|
1.9
|
33.6
|
1.0
|
O2A
|
B:ANP1000
|
2.0
|
31.8
|
1.0
|
O
|
B:HOH1116
|
2.1
|
32.0
|
1.0
|
OD1
|
B:ASN204
|
2.1
|
32.1
|
1.0
|
PA
|
B:ANP1000
|
3.1
|
30.5
|
1.0
|
CG
|
B:ASN204
|
3.1
|
26.4
|
1.0
|
PB
|
B:ANP1000
|
3.2
|
32.1
|
1.0
|
O3A
|
B:ANP1000
|
3.5
|
29.1
|
1.0
|
ND2
|
B:ASN204
|
3.5
|
21.9
|
1.0
|
O1G
|
B:ANP1000
|
3.6
|
37.4
|
1.0
|
O5'
|
B:ANP1000
|
3.7
|
29.8
|
1.0
|
NZ
|
B:LYS97
|
4.0
|
29.8
|
1.0
|
O
|
B:SER203
|
4.2
|
27.6
|
1.0
|
N3B
|
B:ANP1000
|
4.2
|
34.8
|
1.0
|
O2B
|
B:ANP1000
|
4.3
|
33.0
|
1.0
|
PG
|
B:ANP1000
|
4.4
|
43.4
|
1.0
|
O1A
|
B:ANP1000
|
4.4
|
26.6
|
1.0
|
CB
|
B:ALA216
|
4.4
|
26.6
|
1.0
|
CB
|
B:ASN204
|
4.5
|
23.7
|
1.0
|
O
|
B:ASP217
|
4.5
|
35.6
|
1.0
|
OD2
|
B:ASP217
|
4.5
|
38.5
|
1.0
|
OH
|
B:TYR80
|
4.6
|
37.3
|
1.0
|
C8
|
B:ANP1000
|
4.7
|
27.2
|
1.0
|
CA
|
B:ASN204
|
4.7
|
24.4
|
1.0
|
OG
|
B:SER203
|
4.8
|
39.2
|
1.0
|
O3G
|
B:ANP1000
|
4.8
|
44.1
|
1.0
|
C3'
|
B:ANP1000
|
4.8
|
34.8
|
1.0
|
C
|
B:SER203
|
4.9
|
28.6
|
1.0
|
|
Reference:
L.Zhang,
Z.Lou.
CARK1 Phosphorylates Aba Receptors To Be Published.
Page generated: Mon Sep 30 09:18:03 2024
|