Magnesium in PDB 5xnm: Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Enzymatic activity of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
All present enzymatic activity of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum:
1.10.3.9;
Other elements in 5xnm:
The structure of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
160;
Page 17, Binding sites: 161 -
170;
Page 18, Binding sites: 171 -
180;
Page 19, Binding sites: 181 -
190;
Page 20, Binding sites: 191 -
200;
Page 21, Binding sites: 201 -
210;
Page 22, Binding sites: 211 -
220;
Page 23, Binding sites: 221 -
230;
Page 24, Binding sites: 231 -
240;
Page 25, Binding sites: 241 -
250;
Page 26, Binding sites: 251 -
260;
Page 27, Binding sites: 261 -
270;
Page 28, Binding sites: 271 -
280;
Page 29, Binding sites: 281 -
290;
Page 30, Binding sites: 291 -
300;
Page 31, Binding sites: 301 -
310;
Page 32, Binding sites: 311 -
314;
Binding sites:
The binding sites of Magnesium atom in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
(pdb code 5xnm). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 314 binding sites of Magnesium where determined in the
Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum, PDB code: 5xnm:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 1 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg601
b:0.7
occ:1.00
|
MG
|
1:CHL601
|
0.0
|
0.7
|
1.0
|
NA
|
1:CHL601
|
2.0
|
0.7
|
1.0
|
ND
|
1:CHL601
|
2.0
|
0.7
|
1.0
|
NB
|
1:CHL601
|
2.0
|
0.7
|
1.0
|
NC
|
1:CHL601
|
2.0
|
0.7
|
1.0
|
O
|
1:TYR24
|
2.1
|
0.5
|
1.0
|
C4A
|
1:CHL601
|
3.0
|
0.7
|
1.0
|
C4D
|
1:CHL601
|
3.0
|
0.7
|
1.0
|
C1A
|
1:CHL601
|
3.0
|
0.7
|
1.0
|
C4B
|
1:CHL601
|
3.0
|
0.7
|
1.0
|
C1B
|
1:CHL601
|
3.0
|
0.7
|
1.0
|
C1C
|
1:CHL601
|
3.0
|
0.7
|
1.0
|
C4C
|
1:CHL601
|
3.1
|
0.7
|
1.0
|
C1D
|
1:CHL601
|
3.1
|
0.7
|
1.0
|
C
|
1:TYR24
|
3.2
|
0.5
|
1.0
|
CHB
|
1:CHL601
|
3.3
|
0.7
|
1.0
|
CHC
|
1:CHL601
|
3.4
|
0.7
|
1.0
|
CHA
|
1:CHL601
|
3.4
|
0.7
|
1.0
|
CHD
|
1:CHL601
|
3.5
|
0.7
|
1.0
|
CA
|
1:TYR24
|
4.0
|
0.5
|
1.0
|
N
|
1:LEU25
|
4.1
|
0.8
|
1.0
|
CA
|
1:LEU25
|
4.1
|
0.8
|
1.0
|
C3D
|
1:CHL601
|
4.2
|
0.7
|
1.0
|
C3A
|
1:CHL601
|
4.3
|
0.7
|
1.0
|
C2A
|
1:CHL601
|
4.3
|
0.7
|
1.0
|
C3B
|
1:CHL601
|
4.3
|
0.7
|
1.0
|
C10
|
1:LHG2630
|
4.3
|
0.6
|
1.0
|
C2B
|
1:CHL601
|
4.4
|
0.7
|
1.0
|
C2C
|
1:CHL601
|
4.4
|
0.7
|
1.0
|
C39
|
1:XAT1622
|
4.4
|
0.5
|
1.0
|
CD2
|
1:LEU25
|
4.4
|
0.7
|
1.0
|
C2D
|
1:CHL601
|
4.4
|
0.7
|
1.0
|
C3C
|
1:CHL601
|
4.4
|
0.7
|
1.0
|
C8
|
1:LHG2630
|
4.4
|
0.6
|
1.0
|
CB
|
1:TYR24
|
4.6
|
0.8
|
1.0
|
CBD
|
1:CHL601
|
4.9
|
0.7
|
1.0
|
C
|
1:LEU25
|
5.0
|
0.8
|
1.0
|
|
Magnesium binding site 2 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 2 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg602
b:0.8
occ:1.00
|
MG
|
1:CLA602
|
0.0
|
0.8
|
1.0
|
ND
|
1:CLA602
|
2.0
|
0.8
|
1.0
|
NB
|
1:CLA602
|
2.0
|
0.8
|
1.0
|
NC
|
1:CLA602
|
2.1
|
0.8
|
1.0
|
NA
|
1:CLA602
|
2.1
|
0.8
|
1.0
|
OE2
|
1:GLU65
|
2.2
|
0.6
|
1.0
|
CD
|
1:GLU65
|
2.8
|
0.6
|
1.0
|
C4D
|
1:CLA602
|
2.9
|
0.8
|
1.0
|
C1B
|
1:CLA602
|
3.0
|
0.8
|
1.0
|
C4B
|
1:CLA602
|
3.0
|
0.8
|
1.0
|
C1C
|
1:CLA602
|
3.1
|
0.8
|
1.0
|
C4A
|
1:CLA602
|
3.1
|
0.8
|
1.0
|
C1D
|
1:CLA602
|
3.1
|
0.8
|
1.0
|
C4C
|
1:CLA602
|
3.1
|
0.8
|
1.0
|
C1A
|
1:CLA602
|
3.1
|
0.8
|
1.0
|
OE1
|
1:GLU65
|
3.3
|
0.6
|
1.0
|
CHB
|
1:CLA602
|
3.4
|
0.8
|
1.0
|
CHC
|
1:CLA602
|
3.4
|
0.8
|
1.0
|
CHA
|
1:CLA602
|
3.4
|
0.8
|
1.0
|
CHD
|
1:CLA602
|
3.5
|
0.8
|
1.0
|
CG
|
1:GLU65
|
3.6
|
0.6
|
1.0
|
C38
|
1:LUT1621
|
3.6
|
0.2
|
1.0
|
NE
|
1:ARG185
|
3.9
|
0.7
|
1.0
|
NH2
|
1:ARG185
|
4.2
|
0.7
|
1.0
|
C3D
|
1:CLA602
|
4.2
|
0.8
|
1.0
|
C2B
|
1:CLA602
|
4.3
|
0.8
|
1.0
|
C3B
|
1:CLA602
|
4.3
|
0.8
|
1.0
|
C2C
|
1:CLA602
|
4.3
|
0.8
|
1.0
|
C2D
|
1:CLA602
|
4.3
|
0.8
|
1.0
|
C3C
|
1:CLA602
|
4.3
|
0.8
|
1.0
|
CZ
|
1:ARG185
|
4.4
|
0.7
|
1.0
|
C3A
|
1:CLA602
|
4.4
|
0.8
|
1.0
|
C2A
|
1:CLA602
|
4.5
|
0.8
|
1.0
|
CB
|
1:GLU65
|
4.6
|
0.6
|
1.0
|
CG
|
1:ARG185
|
4.8
|
0.7
|
1.0
|
CD
|
1:ARG185
|
4.8
|
0.7
|
1.0
|
CBD
|
1:CLA602
|
4.9
|
0.8
|
1.0
|
|
Magnesium binding site 3 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 3 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg603
b:0.8
occ:1.00
|
MG
|
1:CLA603
|
0.0
|
0.8
|
1.0
|
ND
|
1:CLA603
|
2.0
|
0.8
|
1.0
|
NB
|
1:CLA603
|
2.0
|
0.8
|
1.0
|
NC
|
1:CLA603
|
2.1
|
0.8
|
1.0
|
NA
|
1:CLA603
|
2.1
|
0.8
|
1.0
|
NE2
|
1:HIS68
|
2.2
|
0.3
|
1.0
|
C4D
|
1:CLA603
|
2.9
|
0.8
|
1.0
|
C1B
|
1:CLA603
|
3.0
|
0.8
|
1.0
|
C4A
|
1:CLA603
|
3.0
|
0.8
|
1.0
|
C4B
|
1:CLA603
|
3.1
|
0.8
|
1.0
|
C1C
|
1:CLA603
|
3.1
|
0.8
|
1.0
|
CE1
|
1:HIS68
|
3.1
|
0.3
|
1.0
|
C4C
|
1:CLA603
|
3.1
|
0.8
|
1.0
|
C1D
|
1:CLA603
|
3.1
|
0.8
|
1.0
|
C1A
|
1:CLA603
|
3.1
|
0.8
|
1.0
|
CD2
|
1:HIS68
|
3.2
|
0.3
|
1.0
|
CHA
|
1:CLA603
|
3.4
|
0.8
|
1.0
|
CHB
|
1:CLA603
|
3.4
|
0.8
|
1.0
|
CHC
|
1:CLA603
|
3.4
|
0.8
|
1.0
|
CHD
|
1:CLA603
|
3.5
|
0.8
|
1.0
|
C10
|
1:CHL609
|
3.8
|
0.1
|
1.0
|
C3D
|
1:CLA603
|
4.2
|
0.8
|
1.0
|
ND1
|
1:HIS68
|
4.2
|
0.3
|
1.0
|
C2B
|
1:CLA603
|
4.3
|
0.8
|
1.0
|
C2D
|
1:CLA603
|
4.3
|
0.8
|
1.0
|
C3B
|
1:CLA603
|
4.3
|
0.8
|
1.0
|
CG
|
1:HIS68
|
4.3
|
0.3
|
1.0
|
C2C
|
1:CLA603
|
4.3
|
0.8
|
1.0
|
C3C
|
1:CLA603
|
4.3
|
0.8
|
1.0
|
C7
|
1:CHL609
|
4.4
|
0.1
|
1.0
|
C3A
|
1:CLA603
|
4.4
|
0.8
|
1.0
|
C2A
|
1:CLA603
|
4.4
|
0.8
|
1.0
|
C11
|
1:CHL609
|
4.5
|
0.1
|
1.0
|
C8
|
1:CHL609
|
4.7
|
0.1
|
1.0
|
CBD
|
1:CLA603
|
4.8
|
0.8
|
1.0
|
|
Magnesium binding site 4 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 4 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg604
b:0.1
occ:1.00
|
MG
|
1:CLA604
|
0.0
|
0.1
|
1.0
|
NB
|
1:CLA604
|
2.0
|
0.1
|
1.0
|
ND
|
1:CLA604
|
2.0
|
0.1
|
1.0
|
NC
|
1:CLA604
|
2.1
|
0.1
|
1.0
|
NA
|
1:CLA604
|
2.1
|
0.1
|
1.0
|
C4D
|
1:CLA604
|
2.9
|
0.1
|
1.0
|
C1B
|
1:CLA604
|
3.0
|
0.1
|
1.0
|
C4A
|
1:CLA604
|
3.0
|
0.1
|
1.0
|
C4B
|
1:CLA604
|
3.1
|
0.1
|
1.0
|
C1C
|
1:CLA604
|
3.1
|
0.1
|
1.0
|
C1D
|
1:CLA604
|
3.1
|
0.1
|
1.0
|
C1A
|
1:CLA604
|
3.1
|
0.1
|
1.0
|
C4C
|
1:CLA604
|
3.1
|
0.1
|
1.0
|
CHA
|
1:CLA604
|
3.4
|
0.1
|
1.0
|
CHB
|
1:CLA604
|
3.4
|
0.1
|
1.0
|
CHC
|
1:CLA604
|
3.4
|
0.1
|
1.0
|
CHD
|
1:CLA604
|
3.5
|
0.1
|
1.0
|
C24
|
1:NEX1623
|
3.5
|
0.6
|
1.0
|
O23
|
1:NEX1623
|
3.7
|
0.6
|
1.0
|
C23
|
1:NEX1623
|
4.2
|
0.6
|
1.0
|
C3D
|
1:CLA604
|
4.2
|
0.1
|
1.0
|
C2B
|
1:CLA604
|
4.3
|
0.1
|
1.0
|
C3B
|
1:CLA604
|
4.3
|
0.1
|
1.0
|
C2D
|
1:CLA604
|
4.3
|
0.1
|
1.0
|
C2C
|
1:CLA604
|
4.3
|
0.1
|
1.0
|
C3C
|
1:CLA604
|
4.4
|
0.1
|
1.0
|
C3A
|
1:CLA604
|
4.4
|
0.1
|
1.0
|
O
|
1:GLY78
|
4.4
|
0.1
|
1.0
|
C2A
|
1:CLA604
|
4.4
|
0.1
|
1.0
|
CA
|
1:GLY78
|
4.5
|
0.1
|
1.0
|
C22
|
1:NEX1623
|
4.6
|
0.6
|
1.0
|
CG
|
1:PRO82
|
4.7
|
0.7
|
1.0
|
C25
|
1:NEX1623
|
4.8
|
0.6
|
1.0
|
CBD
|
1:CLA604
|
4.9
|
0.1
|
1.0
|
CMA
|
1:CLA604
|
4.9
|
0.1
|
1.0
|
C18
|
1:LUT1621
|
4.9
|
0.2
|
1.0
|
C
|
1:GLY78
|
4.9
|
0.1
|
1.0
|
CBA
|
1:CLA604
|
4.9
|
0.1
|
1.0
|
C38
|
1:NEX1623
|
5.0
|
0.6
|
1.0
|
|
Magnesium binding site 5 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 5 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg605
b:0.0
occ:1.00
|
MG
|
1:CHL605
|
0.0
|
0.0
|
1.0
|
NA
|
1:CHL605
|
2.0
|
0.0
|
1.0
|
ND
|
1:CHL605
|
2.0
|
0.0
|
1.0
|
NB
|
1:CHL605
|
2.0
|
0.0
|
1.0
|
NC
|
1:CHL605
|
2.0
|
0.0
|
1.0
|
O
|
1:VAL119
|
2.2
|
0.6
|
1.0
|
C4A
|
1:CHL605
|
2.9
|
0.0
|
1.0
|
C4D
|
1:CHL605
|
3.0
|
0.0
|
1.0
|
C1A
|
1:CHL605
|
3.0
|
0.0
|
1.0
|
C1B
|
1:CHL605
|
3.0
|
0.0
|
1.0
|
C1C
|
1:CHL605
|
3.0
|
0.0
|
1.0
|
C4B
|
1:CHL605
|
3.1
|
0.0
|
1.0
|
C4C
|
1:CHL605
|
3.1
|
0.0
|
1.0
|
C1D
|
1:CHL605
|
3.1
|
0.0
|
1.0
|
CHB
|
1:CHL605
|
3.3
|
0.0
|
1.0
|
C
|
1:VAL119
|
3.4
|
0.6
|
1.0
|
CHC
|
1:CHL605
|
3.4
|
0.0
|
1.0
|
CHA
|
1:CHL605
|
3.4
|
0.0
|
1.0
|
CHD
|
1:CHL605
|
3.5
|
0.0
|
1.0
|
CA
|
1:VAL119
|
4.1
|
0.6
|
1.0
|
O
|
1:HIS120
|
4.2
|
0.2
|
1.0
|
C3D
|
1:CHL605
|
4.2
|
0.0
|
1.0
|
C2A
|
1:CHL605
|
4.2
|
0.0
|
1.0
|
C
|
1:HIS120
|
4.2
|
0.2
|
1.0
|
C3A
|
1:CHL605
|
4.3
|
0.0
|
1.0
|
C2C
|
1:CHL605
|
4.3
|
0.0
|
1.0
|
C3B
|
1:CHL605
|
4.3
|
0.0
|
1.0
|
C2B
|
1:CHL605
|
4.4
|
0.0
|
1.0
|
C2D
|
1:CHL605
|
4.4
|
0.0
|
1.0
|
C3C
|
1:CHL605
|
4.4
|
0.0
|
1.0
|
N
|
1:HIS120
|
4.4
|
0.2
|
1.0
|
N
|
1:ALA121
|
4.5
|
0.1
|
1.0
|
CA
|
1:HIS120
|
4.7
|
0.2
|
1.0
|
CG1
|
1:VAL119
|
4.7
|
0.3
|
1.0
|
CB
|
1:HIS120
|
4.8
|
99.6
|
1.0
|
CA
|
1:ALA121
|
4.8
|
0.1
|
1.0
|
CAA
|
1:CHL605
|
4.8
|
0.0
|
1.0
|
CBD
|
1:CHL605
|
4.9
|
0.0
|
1.0
|
O
|
1:LEU118
|
5.0
|
98.8
|
1.0
|
|
Magnesium binding site 6 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 6 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg606
b:0.9
occ:1.00
|
MG
|
1:CHL606
|
0.0
|
0.9
|
1.0
|
NA
|
1:CHL606
|
2.0
|
0.9
|
1.0
|
ND
|
1:CHL606
|
2.0
|
0.9
|
1.0
|
NB
|
1:CHL606
|
2.0
|
0.9
|
1.0
|
NC
|
1:CHL606
|
2.1
|
0.9
|
1.0
|
C4A
|
1:CHL606
|
2.9
|
0.9
|
1.0
|
C4D
|
1:CHL606
|
3.0
|
0.9
|
1.0
|
C1A
|
1:CHL606
|
3.0
|
0.9
|
1.0
|
C1B
|
1:CHL606
|
3.0
|
0.9
|
1.0
|
C4B
|
1:CHL606
|
3.0
|
0.9
|
1.0
|
C1C
|
1:CHL606
|
3.1
|
0.9
|
1.0
|
C4C
|
1:CHL606
|
3.1
|
0.9
|
1.0
|
C1D
|
1:CHL606
|
3.1
|
0.9
|
1.0
|
CHB
|
1:CHL606
|
3.3
|
0.9
|
1.0
|
CHC
|
1:CHL606
|
3.4
|
0.9
|
1.0
|
CHA
|
1:CHL606
|
3.4
|
0.9
|
1.0
|
CHD
|
1:CHL606
|
3.6
|
0.9
|
1.0
|
C3D
|
1:CHL606
|
4.2
|
0.9
|
1.0
|
C38
|
1:NEX1623
|
4.2
|
0.6
|
1.0
|
C3A
|
1:CHL606
|
4.3
|
0.9
|
1.0
|
C2A
|
1:CHL606
|
4.3
|
0.9
|
1.0
|
C3B
|
1:CHL606
|
4.3
|
0.9
|
1.0
|
C2B
|
1:CHL606
|
4.3
|
0.9
|
1.0
|
C2C
|
1:CHL606
|
4.4
|
0.9
|
1.0
|
C2D
|
1:CHL606
|
4.4
|
0.9
|
1.0
|
C3C
|
1:CHL606
|
4.4
|
0.9
|
1.0
|
OE1
|
1:GLN131
|
4.7
|
0.4
|
1.0
|
CG2
|
1:ILE127
|
4.8
|
98.3
|
1.0
|
CBD
|
1:CHL606
|
4.9
|
0.9
|
1.0
|
CD
|
1:GLN131
|
5.0
|
0.4
|
1.0
|
O2A
|
1:CLA604
|
5.0
|
0.1
|
1.0
|
CHB
|
1:CLA604
|
5.0
|
0.1
|
1.0
|
|
Magnesium binding site 7 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 7 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg607
b:0.8
occ:1.00
|
MG
|
1:CHL607
|
0.0
|
0.8
|
1.0
|
NA
|
1:CHL607
|
2.0
|
0.8
|
1.0
|
ND
|
1:CHL607
|
2.0
|
0.8
|
1.0
|
NB
|
1:CHL607
|
2.0
|
0.8
|
1.0
|
NC
|
1:CHL607
|
2.0
|
0.8
|
1.0
|
C4A
|
1:CHL607
|
2.9
|
0.8
|
1.0
|
C4D
|
1:CHL607
|
3.0
|
0.8
|
1.0
|
C1A
|
1:CHL607
|
3.0
|
0.8
|
1.0
|
C1C
|
1:CHL607
|
3.0
|
0.8
|
1.0
|
C1B
|
1:CHL607
|
3.0
|
0.8
|
1.0
|
C4B
|
1:CHL607
|
3.1
|
0.8
|
1.0
|
C4C
|
1:CHL607
|
3.1
|
0.8
|
1.0
|
C1D
|
1:CHL607
|
3.2
|
0.8
|
1.0
|
CHB
|
1:CHL607
|
3.3
|
0.8
|
1.0
|
CHC
|
1:CHL607
|
3.4
|
0.8
|
1.0
|
CHA
|
1:CHL607
|
3.4
|
0.8
|
1.0
|
CHD
|
1:CHL607
|
3.6
|
0.8
|
1.0
|
OMC
|
1:CHL606
|
3.6
|
0.9
|
1.0
|
C18
|
3:XAT1622
|
4.2
|
1.0
|
1.0
|
C3D
|
1:CHL607
|
4.2
|
0.8
|
1.0
|
C15
|
3:CHL601
|
4.2
|
0.3
|
1.0
|
C3A
|
1:CHL607
|
4.3
|
0.8
|
1.0
|
C2A
|
1:CHL607
|
4.3
|
0.8
|
1.0
|
CMC
|
1:CHL606
|
4.3
|
0.9
|
1.0
|
C2C
|
1:CHL607
|
4.3
|
0.8
|
1.0
|
C17
|
3:CHL601
|
4.3
|
0.3
|
1.0
|
C3B
|
1:CHL607
|
4.4
|
0.8
|
1.0
|
C2B
|
1:CHL607
|
4.4
|
0.8
|
1.0
|
C2D
|
1:CHL607
|
4.4
|
0.8
|
1.0
|
C3C
|
1:CHL607
|
4.4
|
0.8
|
1.0
|
CBD
|
1:CHL607
|
4.9
|
0.8
|
1.0
|
C16
|
3:CHL601
|
4.9
|
0.3
|
1.0
|
CMA
|
1:CHL607
|
5.0
|
0.8
|
1.0
|
|
Magnesium binding site 8 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 8 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg608
b:0.0
occ:1.00
|
MG
|
1:CHL608
|
0.0
|
0.0
|
1.0
|
NA
|
1:CHL608
|
2.0
|
0.0
|
1.0
|
ND
|
1:CHL608
|
2.0
|
0.0
|
1.0
|
NB
|
1:CHL608
|
2.0
|
0.0
|
1.0
|
NC
|
1:CHL608
|
2.1
|
0.0
|
1.0
|
C4D
|
1:CHL608
|
3.0
|
0.0
|
1.0
|
C4A
|
1:CHL608
|
3.0
|
0.0
|
1.0
|
C1A
|
1:CHL608
|
3.0
|
0.0
|
1.0
|
C1B
|
1:CHL608
|
3.0
|
0.0
|
1.0
|
C4B
|
1:CHL608
|
3.1
|
0.0
|
1.0
|
C1C
|
1:CHL608
|
3.1
|
0.0
|
1.0
|
C4C
|
1:CHL608
|
3.1
|
0.0
|
1.0
|
C1D
|
1:CHL608
|
3.1
|
0.0
|
1.0
|
CZ
|
1:PHE161
|
3.3
|
1.0
|
1.0
|
CHB
|
1:CHL608
|
3.3
|
0.0
|
1.0
|
CHC
|
1:CHL608
|
3.4
|
0.0
|
1.0
|
CHA
|
1:CHL608
|
3.4
|
0.0
|
1.0
|
CHD
|
1:CHL608
|
3.6
|
0.0
|
1.0
|
CE1
|
1:PHE161
|
3.9
|
1.0
|
1.0
|
CG1
|
1:VAL138
|
4.0
|
93.7
|
1.0
|
CE2
|
1:PHE161
|
4.1
|
1.0
|
1.0
|
C3D
|
1:CHL608
|
4.2
|
0.0
|
1.0
|
C3A
|
1:CHL608
|
4.3
|
0.0
|
1.0
|
C2A
|
1:CHL608
|
4.3
|
0.0
|
1.0
|
C2B
|
1:CHL608
|
4.3
|
0.0
|
1.0
|
C3B
|
1:CHL608
|
4.3
|
0.0
|
1.0
|
C2C
|
1:CHL608
|
4.4
|
0.0
|
1.0
|
C2D
|
1:CHL608
|
4.4
|
0.0
|
1.0
|
C3C
|
1:CHL608
|
4.4
|
0.0
|
1.0
|
O
|
1:VAL138
|
4.6
|
0.9
|
1.0
|
CBA
|
1:CHL608
|
4.7
|
0.0
|
1.0
|
CBD
|
1:CHL608
|
4.9
|
0.0
|
1.0
|
CB
|
1:ARG142
|
5.0
|
0.3
|
1.0
|
|
Magnesium binding site 9 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 9 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg609
b:0.1
occ:1.00
|
MG
|
1:CHL609
|
0.0
|
0.1
|
1.0
|
NA
|
1:CHL609
|
2.0
|
0.1
|
1.0
|
ND
|
1:CHL609
|
2.0
|
0.1
|
1.0
|
NB
|
1:CHL609
|
2.0
|
0.1
|
1.0
|
NC
|
1:CHL609
|
2.0
|
0.1
|
1.0
|
OE1
|
1:GLU139
|
2.2
|
0.2
|
1.0
|
C4A
|
1:CHL609
|
2.9
|
0.1
|
1.0
|
C4D
|
1:CHL609
|
3.0
|
0.1
|
1.0
|
C1A
|
1:CHL609
|
3.0
|
0.1
|
1.0
|
C1B
|
1:CHL609
|
3.0
|
0.1
|
1.0
|
C1C
|
1:CHL609
|
3.0
|
0.1
|
1.0
|
C4B
|
1:CHL609
|
3.1
|
0.1
|
1.0
|
C4C
|
1:CHL609
|
3.1
|
0.1
|
1.0
|
C1D
|
1:CHL609
|
3.1
|
0.1
|
1.0
|
CD
|
1:GLU139
|
3.1
|
0.2
|
1.0
|
CHB
|
1:CHL609
|
3.2
|
0.1
|
1.0
|
CHC
|
1:CHL609
|
3.4
|
0.1
|
1.0
|
CHA
|
1:CHL609
|
3.4
|
0.1
|
1.0
|
CHD
|
1:CHL609
|
3.5
|
0.1
|
1.0
|
CG
|
1:GLU139
|
3.8
|
0.2
|
1.0
|
OE2
|
1:GLU139
|
4.1
|
0.2
|
1.0
|
C3D
|
1:CHL609
|
4.2
|
0.1
|
1.0
|
C3A
|
1:CHL609
|
4.2
|
0.1
|
1.0
|
C2A
|
1:CHL609
|
4.3
|
0.1
|
1.0
|
C2B
|
1:CHL609
|
4.3
|
0.1
|
1.0
|
C3B
|
1:CHL609
|
4.3
|
0.1
|
1.0
|
C2C
|
1:CHL609
|
4.3
|
0.1
|
1.0
|
CB
|
1:GLU139
|
4.4
|
0.2
|
1.0
|
C2D
|
1:CHL609
|
4.4
|
0.1
|
1.0
|
C3C
|
1:CHL609
|
4.4
|
0.1
|
1.0
|
CMD
|
1:CLA603
|
4.5
|
0.8
|
1.0
|
CBA
|
1:CHL609
|
4.6
|
0.1
|
1.0
|
NH2
|
1:ARG142
|
4.6
|
0.3
|
1.0
|
C4
|
3:CHL601
|
4.8
|
0.3
|
1.0
|
CBD
|
1:CHL609
|
4.9
|
0.1
|
1.0
|
|
Magnesium binding site 10 out
of 314 in 5xnm
Go back to
Magnesium Binding Sites List in 5xnm
Magnesium binding site 10 out
of 314 in the Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Structure of Unstacked C2S2M2-Type Psii-Lhcii Supercomplex From Pisum Sativum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg610
b:0.2
occ:1.00
|
MG
|
1:CLA610
|
0.0
|
0.2
|
1.0
|
NB
|
1:CLA610
|
2.0
|
0.2
|
1.0
|
ND
|
1:CLA610
|
2.0
|
0.2
|
1.0
|
NC
|
1:CLA610
|
2.1
|
0.2
|
1.0
|
NA
|
1:CLA610
|
2.1
|
0.2
|
1.0
|
OE2
|
1:GLU180
|
2.2
|
0.1
|
1.0
|
CD
|
1:GLU180
|
2.9
|
0.1
|
1.0
|
C4D
|
1:CLA610
|
2.9
|
0.2
|
1.0
|
C1B
|
1:CLA610
|
3.0
|
0.2
|
1.0
|
C4B
|
1:CLA610
|
3.0
|
0.2
|
1.0
|
C1C
|
1:CLA610
|
3.0
|
0.2
|
1.0
|
C4A
|
1:CLA610
|
3.0
|
0.2
|
1.0
|
C4C
|
1:CLA610
|
3.1
|
0.2
|
1.0
|
C1A
|
1:CLA610
|
3.1
|
0.2
|
1.0
|
C1D
|
1:CLA610
|
3.1
|
0.2
|
1.0
|
CHC
|
1:CLA610
|
3.4
|
0.2
|
1.0
|
CHB
|
1:CLA610
|
3.4
|
0.2
|
1.0
|
CHA
|
1:CLA610
|
3.5
|
0.2
|
1.0
|
OE1
|
1:GLU180
|
3.5
|
0.1
|
1.0
|
CHD
|
1:CLA610
|
3.5
|
0.2
|
1.0
|
CG
|
1:GLU180
|
3.7
|
0.1
|
1.0
|
NE
|
1:ARG70
|
3.9
|
0.2
|
1.0
|
NH2
|
1:ARG70
|
4.1
|
0.2
|
1.0
|
CZ
|
1:ARG70
|
4.1
|
0.2
|
1.0
|
C3D
|
1:CLA610
|
4.2
|
0.2
|
1.0
|
C3B
|
1:CLA610
|
4.3
|
0.2
|
1.0
|
C2B
|
1:CLA610
|
4.3
|
0.2
|
1.0
|
C2C
|
1:CLA610
|
4.3
|
0.2
|
1.0
|
C3C
|
1:CLA610
|
4.3
|
0.2
|
1.0
|
C2D
|
1:CLA610
|
4.3
|
0.2
|
1.0
|
C3A
|
1:CLA610
|
4.4
|
0.2
|
1.0
|
C2A
|
1:CLA610
|
4.4
|
0.2
|
1.0
|
CD
|
1:ARG70
|
4.6
|
0.2
|
1.0
|
CB
|
1:GLU180
|
4.7
|
0.1
|
1.0
|
CBD
|
1:CLA610
|
4.9
|
0.2
|
1.0
|
CBA
|
1:CLA610
|
4.9
|
0.2
|
1.0
|
NH1
|
1:ARG70
|
5.0
|
0.2
|
1.0
|
CG
|
1:ARG70
|
5.0
|
0.2
|
1.0
|
CMA
|
1:CLA610
|
5.0
|
0.2
|
1.0
|
|
Reference:
X.Su,
J.Ma,
X.Wei,
P.Cao,
D.Zhu,
W.Chang,
Z.Liu,
X.Zhang,
M.Li.
Structure and Assembly Mechanism of Plant C2S2M2-Type Psii-Lhcii Supercomplex Science V. 357 815 2017.
ISSN: ESSN 1095-9203
PubMed: 28839073
DOI: 10.1126/SCIENCE.AAN0327
Page generated: Mon Sep 30 09:36:03 2024
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