Magnesium in PDB 5xoj: Crystal Structure of XPO1P-Pki-NUP42P-GSP1P-Gtp Complex

The structure of Crystal Structure of XPO1P-Pki-NUP42P-GSP1P-Gtp Complex, PDB code: 5xoj was solved by M.Koyama, N.Shirai, Y.Matsuura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.58 / 2.20
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	101.640, 107.560, 149.110, 90.00, 90.00, 90.00
R / Rfree (%)	19.1 / 22

The binding sites of Magnesium atom in the Crystal Structure of XPO1P-Pki-NUP42P-GSP1P-Gtp Complex (pdb code 5xoj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of XPO1P-Pki-NUP42P-GSP1P-Gtp Complex, PDB code: 5xoj:

Magnesium binding site 1 out of 1 in the Crystal Structure of XPO1P-Pki-NUP42P-GSP1P-Gtp Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of XPO1P-Pki-NUP42P-GSP1P-Gtp Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg202 b:26.1 occ:1.00 O2G A:GTP201 2.0 26.8 1.0 OG1 A:THR26 2.0 22.6 1.0 O A:HOH309 2.0 25.2 1.0 OG1 A:THR44 2.0 27.0 1.0 O2B A:GTP201 2.1 21.7 1.0 O A:HOH306 2.1 25.3 1.0 CB A:THR44 3.1 25.3 1.0 CB A:THR26 3.1 22.0 1.0 PG A:GTP201 3.2 25.0 1.0 PB A:GTP201 3.3 25.9 1.0 O3B A:GTP201 3.7 28.9 1.0 OD2 A:ASP67 3.7 35.0 1.0 N A:THR44 3.7 28.4 1.0 O1G A:GTP201 3.8 29.6 1.0 O1A A:GTP201 3.9 30.8 1.0 N A:THR26 3.9 22.1 1.0 CA A:THR44 4.0 30.4 1.0 OD1 A:ASP67 4.0 36.0 1.0 CA A:THR26 4.1 22.6 1.0 O A:HOH319 4.2 30.2 1.0 CG2 A:THR26 4.2 20.4 1.0 CG2 A:THR44 4.2 24.6 1.0 CG A:ASP67 4.3 35.1 1.0 O1B A:GTP201 4.3 25.6 1.0 O3A A:GTP201 4.4 44.0 1.0 O3G A:GTP201 4.4 25.8 1.0 PA A:GTP201 4.6 25.3 1.0 O A:THR68 4.6 26.6 1.0 O A:ILE42 4.7 34.0 1.0 O2A A:GTP201 4.8 21.0 1.0 C A:ALA43 4.8 27.3 1.0 CB A:LYS25 4.9 18.6 1.0 NZ A:LYS25 4.9 28.2 1.0 CE A:LYS25 5.0 27.0 1.0

M.Koyama, H.Hirano, N.Shirai, Y.Matsuura. Crystal Structure of the XPO1P Nuclear Export Complex Bound to the Sxfg/Pxfg Repeats of the Nucleoporin NUP42P Genes Cells V. 22 861 2017.
ISSN: ESSN 1365-2443
PubMed: 28791779
DOI: 10.1111/GTC.12520