Magnesium in PDB 5y1x: Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin

The structure of Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin, PDB code: 5y1x was solved by A.K.Marapaka, A.Addlagatta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.66 / 1.55
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	75.723, 109.623, 113.134, 90.00, 90.00, 90.00
R / Rfree (%)	18.9 / 22.6

The structure of Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Magnesium atom in the Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin (pdb code 5y1x). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin, PDB code: 5y1x:

Magnesium binding site 1 out of 1 in the Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1102 b:41.3 occ:1.00 O A:HOH1740 1.8 27.3 0.5 O A:HOH1560 2.0 24.6 0.5 O A:HOH1776 2.0 31.1 0.5 O A:HOH1550 2.0 26.9 0.5 O A:HOH1507 2.1 31.7 0.5 O A:HOH1762 2.1 63.6 1.0 OE2 A:GLU957 3.8 31.0 1.0 O A:HOH1526 3.9 37.3 1.0 ND2 A:ASN992 3.9 29.1 1.0 O A:HOH1686 4.1 44.3 1.0 OD2 A:ASP995 4.1 32.0 1.0 O A:HOH1782 4.2 35.3 1.0 O A:HOH1340 4.4 31.9 1.0 O A:HOH1670 4.5 42.9 1.0 O A:HOH1564 4.7 30.4 1.0 CD A:GLU957 4.7 33.5 1.0 CB A:ASN992 4.9 24.8 1.0 CG A:ASN992 4.9 29.3 1.0 CE A:LYS311 4.9 39.8 1.0

A.K.Marapaka, A.Addlagatta. Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin To Be Published.