Magnesium in PDB 5y4i: Crystal Structure of Glucose Isomerase in Complex with Glycerol in One Metal Binding Mode

Enzymatic activity of Crystal Structure of Glucose Isomerase in Complex with Glycerol in One Metal Binding Mode

Protein crystallography data

Magnesium Binding Sites:

Magnesium binding site 1 out of 1 in 5y4i

Magnesium Binding Sites List in 5y4i

Magnesium binding site 1 out of 1 in the Crystal Structure of Glucose Isomerase in Complex with Glycerol in One Metal Binding Mode


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Glucose Isomerase in Complex with Glycerol in One Metal Binding Mode within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:9.9 occ:1.00 OE2 A:GLU217 2.0 12.8 1.0 OE2 A:GLU181 2.1 11.2 1.0 OD2 A:ASP287 2.1 12.2 1.0 O2 A:GOL403 2.1 21.0 1.0 OD2 A:ASP245 2.1 9.9 1.0 O3 A:GOL403 2.2 18.5 1.0 C2 A:GOL403 2.9 20.4 1.0 C3 A:GOL403 3.0 22.4 1.0 CD A:GLU181 3.0 10.0 1.0 CG A:ASP287 3.2 9.6 1.0 CD A:GLU217 3.2 11.2 1.0 OE1 A:GLU181 3.3 10.6 1.0 CG A:ASP245 3.3 9.6 1.0 CB A:ASP287 3.8 8.5 1.0 O A:HOH599 3.9 16.8 1.0 CB A:ASP245 3.9 8.0 1.0 O A:HOH745 3.9 37.6 1.0 OE1 A:GLU217 4.0 12.7 1.0 OD1 A:ASP287 4.2 10.0 1.0 CE1 A:HIS220 4.2 7.7 1.0 OD1 A:ASP245 4.2 11.1 1.0 CG A:GLU217 4.2 8.7 1.0 C1 A:GOL403 4.3 21.2 1.0 CB A:GLU217 4.3 6.9 1.0 CG A:GLU181 4.4 8.9 1.0 NE2 A:HIS220 4.6 7.5 1.0 ND2 A:ASN215 4.6 8.0 1.0 O A:HOH510 4.8 30.8 1.0

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