Magnesium in PDB 5zc6: Solution Structure of H-RAST35S Mutant Protein in Complex with KBFM123

The binding sites of Magnesium atom in the Solution Structure of H-RAST35S Mutant Protein in Complex with KBFM123 (pdb code 5zc6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Solution Structure of H-RAST35S Mutant Protein in Complex with KBFM123, PDB code: 5zc6:

Magnesium binding site 1 out of 1 in the Solution Structure of H-RAST35S Mutant Protein in Complex with KBFM123


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Solution Structure of H-RAST35S Mutant Protein in Complex with KBFM123 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg203 b:16.2 occ:1.00 O1G A:GNP201 2.0 0.0 1.0 O2B A:GNP201 2.2 0.0 1.0 OG A:SER17 2.2 0.0 1.0 HG A:SER17 2.3 0.0 1.0 PG A:GNP201 3.1 0.0 1.0 PB A:GNP201 3.2 0.0 1.0 CB A:SER17 3.4 0.0 1.0 N3B A:GNP201 3.5 0.0 1.0 O2G A:GNP201 3.6 0.0 1.0 O1B A:GNP201 3.7 0.0 1.0 HB3 A:SER17 3.7 0.0 1.0 HZ1 A:LYS16 3.7 0.0 1.0 HB2 A:SER17 3.7 0.0 1.0 H A:SER17 3.9 0.0 1.0 HNB3 A:GNP201 4.0 0.0 1.0 HZ3 A:LYS16 4.2 0.0 1.0 O1A A:GNP201 4.3 0.0 1.0 OD2 A:ASP57 4.3 0.0 1.0 NZ A:LYS16 4.4 0.0 1.0 HE1 A:TYR32 4.4 0.0 1.0 O3G A:GNP201 4.4 0.0 1.0 O3A A:GNP201 4.5 0.0 1.0 HG22 A:VAL29 4.6 0.0 1.0 N A:SER17 4.6 0.0 1.0 CA A:SER17 4.7 0.0 1.0 HZ2 A:LYS16 4.7 0.0 1.0 OH A:TYR32 4.8 0.0 1.0 HG11 A:VAL29 4.8 0.0 1.0 HD2 A:LYS16 4.9 0.0 1.0

S.Matsumoto, T.Hiraga, Y.Hayashi, Y.Yoshikawa, C.Tsuda, M.Araki, M.Neya, F.Shima, T.Kataoka. Molecular Basis For Allosteric Inhibition of Gtp-Bound H-Ras Protein By A Small-Molecule Compound Carrying A Naphthalene Ring Biochemistry V. 57 5350 2018.
ISSN: ISSN 1520-4995
PubMed: 30141910
DOI: 10.1021/ACS.BIOCHEM.8B00680