Magnesium in PDB 5zji: Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Enzymatic activity of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
All present enzymatic activity of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II:
1.97.1.12;
Other elements in 5zji:
The structure of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
160;
Page 17, Binding sites: 161 -
170;
Page 18, Binding sites: 171 -
180;
Page 19, Binding sites: 181 -
190;
Page 20, Binding sites: 191 -
200;
Page 21, Binding sites: 201 -
202;
Binding sites:
The binding sites of Magnesium atom in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
(pdb code 5zji). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 202 binding sites of Magnesium where determined in the
Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II, PDB code: 5zji:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 1 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg601
b:63.7
occ:1.00
|
MG
|
1:CHL601
|
0.0
|
63.7
|
1.0
|
NA
|
1:CHL601
|
2.0
|
63.7
|
1.0
|
ND
|
1:CHL601
|
2.0
|
63.7
|
1.0
|
NB
|
1:CHL601
|
2.0
|
63.7
|
1.0
|
NC
|
1:CHL601
|
2.1
|
63.7
|
1.0
|
O
|
1:TRP49
|
2.2
|
62.8
|
1.0
|
C4D
|
1:CHL601
|
2.9
|
63.7
|
1.0
|
C4A
|
1:CHL601
|
2.9
|
63.7
|
1.0
|
C1A
|
1:CHL601
|
3.0
|
63.7
|
1.0
|
C1B
|
1:CHL601
|
3.0
|
63.7
|
1.0
|
C4B
|
1:CHL601
|
3.0
|
63.7
|
1.0
|
C1C
|
1:CHL601
|
3.1
|
63.7
|
1.0
|
C4C
|
1:CHL601
|
3.1
|
63.7
|
1.0
|
C1D
|
1:CHL601
|
3.1
|
63.7
|
1.0
|
CHB
|
1:CHL601
|
3.3
|
63.7
|
1.0
|
CHC
|
1:CHL601
|
3.4
|
63.7
|
1.0
|
CHA
|
1:CHL601
|
3.4
|
63.7
|
1.0
|
C
|
1:TRP49
|
3.5
|
62.8
|
1.0
|
CHD
|
1:CHL601
|
3.5
|
63.7
|
1.0
|
C11
|
1:LHG620
|
3.9
|
65.7
|
1.0
|
C10
|
1:LHG620
|
3.9
|
65.7
|
1.0
|
C3D
|
1:CHL601
|
4.1
|
63.7
|
1.0
|
C3A
|
1:CHL601
|
4.2
|
63.7
|
1.0
|
CA
|
1:TRP49
|
4.3
|
62.8
|
1.0
|
C2A
|
1:CHL601
|
4.3
|
63.7
|
1.0
|
C3B
|
1:CHL601
|
4.3
|
63.7
|
1.0
|
C2B
|
1:CHL601
|
4.4
|
63.7
|
1.0
|
C2D
|
1:CHL601
|
4.4
|
63.7
|
1.0
|
C2C
|
1:CHL601
|
4.4
|
63.7
|
1.0
|
C3C
|
1:CHL601
|
4.4
|
63.7
|
1.0
|
C9
|
1:LHG620
|
4.4
|
65.7
|
1.0
|
C8
|
1:LHG620
|
4.4
|
65.7
|
1.0
|
N
|
1:MET50
|
4.5
|
63.4
|
1.0
|
CA
|
1:MET50
|
4.7
|
63.4
|
1.0
|
CB
|
1:TRP49
|
4.7
|
62.8
|
1.0
|
CBD
|
1:CHL601
|
4.9
|
63.7
|
1.0
|
CE3
|
1:TRP49
|
4.9
|
62.8
|
1.0
|
|
Magnesium binding site 2 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 2 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg602
b:63.7
occ:1.00
|
MG
|
1:CLA602
|
0.0
|
63.7
|
1.0
|
NB
|
1:CLA602
|
2.0
|
63.7
|
1.0
|
ND
|
1:CLA602
|
2.0
|
63.7
|
1.0
|
OE2
|
1:GLU88
|
2.1
|
64.9
|
1.0
|
NA
|
1:CLA602
|
2.1
|
63.7
|
1.0
|
NC
|
1:CLA602
|
2.1
|
63.7
|
1.0
|
C4D
|
1:CLA602
|
2.9
|
63.7
|
1.0
|
CD
|
1:GLU88
|
3.0
|
64.9
|
1.0
|
C1B
|
1:CLA602
|
3.0
|
63.7
|
1.0
|
C4A
|
1:CLA602
|
3.0
|
63.7
|
1.0
|
C4B
|
1:CLA602
|
3.1
|
63.7
|
1.0
|
C1C
|
1:CLA602
|
3.1
|
63.7
|
1.0
|
C4C
|
1:CLA602
|
3.1
|
63.7
|
1.0
|
C1A
|
1:CLA602
|
3.1
|
63.7
|
1.0
|
C1D
|
1:CLA602
|
3.2
|
63.7
|
1.0
|
CHB
|
1:CLA602
|
3.4
|
63.7
|
1.0
|
CHC
|
1:CLA602
|
3.4
|
63.7
|
1.0
|
CHA
|
1:CLA602
|
3.5
|
63.7
|
1.0
|
OE1
|
1:GLU88
|
3.5
|
64.9
|
1.0
|
CHD
|
1:CLA602
|
3.5
|
63.7
|
1.0
|
C38
|
1:XAT618
|
3.7
|
65.3
|
1.0
|
CG
|
1:GLU88
|
3.9
|
64.9
|
1.0
|
NH2
|
1:ARG197
|
4.0
|
64.7
|
1.0
|
NE
|
1:ARG197
|
4.0
|
64.7
|
1.0
|
C3D
|
1:CLA602
|
4.3
|
63.7
|
1.0
|
C2B
|
1:CLA602
|
4.3
|
63.7
|
1.0
|
C3B
|
1:CLA602
|
4.3
|
63.7
|
1.0
|
C2C
|
1:CLA602
|
4.3
|
63.7
|
1.0
|
C2D
|
1:CLA602
|
4.4
|
63.7
|
1.0
|
CZ
|
1:ARG197
|
4.4
|
64.7
|
1.0
|
C3C
|
1:CLA602
|
4.4
|
63.7
|
1.0
|
C3A
|
1:CLA602
|
4.4
|
63.7
|
1.0
|
C2A
|
1:CLA602
|
4.5
|
63.7
|
1.0
|
CBD
|
1:CLA602
|
4.9
|
63.7
|
1.0
|
CB
|
1:GLU88
|
4.9
|
64.9
|
1.0
|
|
Magnesium binding site 3 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 3 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg603
b:61.7
occ:1.00
|
MG
|
1:CLA603
|
0.0
|
61.7
|
1.0
|
NB
|
1:CLA603
|
2.0
|
61.7
|
1.0
|
ND
|
1:CLA603
|
2.0
|
61.7
|
1.0
|
NC
|
1:CLA603
|
2.1
|
61.7
|
1.0
|
NA
|
1:CLA603
|
2.1
|
61.7
|
1.0
|
NE2
|
1:HIS91
|
2.2
|
65.1
|
1.0
|
C4D
|
1:CLA603
|
2.9
|
61.7
|
1.0
|
C1B
|
1:CLA603
|
3.0
|
61.7
|
1.0
|
CE1
|
1:HIS91
|
3.0
|
65.1
|
1.0
|
C4B
|
1:CLA603
|
3.0
|
61.7
|
1.0
|
C4A
|
1:CLA603
|
3.0
|
61.7
|
1.0
|
C1C
|
1:CLA603
|
3.1
|
61.7
|
1.0
|
C4C
|
1:CLA603
|
3.1
|
61.7
|
1.0
|
C1D
|
1:CLA603
|
3.1
|
61.7
|
1.0
|
C1A
|
1:CLA603
|
3.2
|
61.7
|
1.0
|
CD2
|
1:HIS91
|
3.3
|
65.1
|
1.0
|
CHB
|
1:CLA603
|
3.4
|
61.7
|
1.0
|
CHC
|
1:CLA603
|
3.4
|
61.7
|
1.0
|
CHA
|
1:CLA603
|
3.5
|
61.7
|
1.0
|
CHD
|
1:CLA603
|
3.5
|
61.7
|
1.0
|
C2B
|
1:CLA603
|
4.2
|
61.7
|
1.0
|
ND1
|
1:HIS91
|
4.2
|
65.1
|
1.0
|
C3B
|
1:CLA603
|
4.2
|
61.7
|
1.0
|
C3D
|
1:CLA603
|
4.2
|
61.7
|
1.0
|
C2C
|
1:CLA603
|
4.3
|
61.7
|
1.0
|
C2D
|
1:CLA603
|
4.4
|
61.7
|
1.0
|
C3C
|
1:CLA603
|
4.4
|
61.7
|
1.0
|
C3A
|
1:CLA603
|
4.4
|
61.7
|
1.0
|
CG
|
1:HIS91
|
4.4
|
65.1
|
1.0
|
C2A
|
1:CLA603
|
4.4
|
61.7
|
1.0
|
CBD
|
1:CLA603
|
4.9
|
61.7
|
1.0
|
|
Magnesium binding site 4 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 4 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg604
b:76.8
occ:1.00
|
MG
|
1:CLA604
|
0.0
|
76.8
|
1.0
|
NB
|
1:CLA604
|
2.0
|
76.8
|
1.0
|
ND
|
1:CLA604
|
2.0
|
76.8
|
1.0
|
NC
|
1:CLA604
|
2.1
|
76.8
|
1.0
|
NA
|
1:CLA604
|
2.1
|
76.8
|
1.0
|
C4D
|
1:CLA604
|
2.9
|
76.8
|
1.0
|
C1B
|
1:CLA604
|
3.0
|
76.8
|
1.0
|
C4A
|
1:CLA604
|
3.0
|
76.8
|
1.0
|
C4B
|
1:CLA604
|
3.1
|
76.8
|
1.0
|
C1C
|
1:CLA604
|
3.1
|
76.8
|
1.0
|
C4C
|
1:CLA604
|
3.1
|
76.8
|
1.0
|
C1D
|
1:CLA604
|
3.1
|
76.8
|
1.0
|
C1A
|
1:CLA604
|
3.2
|
76.8
|
1.0
|
CHB
|
1:CLA604
|
3.4
|
76.8
|
1.0
|
CHC
|
1:CLA604
|
3.4
|
76.8
|
1.0
|
CHA
|
1:CLA604
|
3.5
|
76.8
|
1.0
|
C28
|
1:BCR619
|
3.5
|
77.8
|
1.0
|
CHD
|
1:CLA604
|
3.5
|
76.8
|
1.0
|
C27
|
1:BCR619
|
4.1
|
77.8
|
1.0
|
C3D
|
1:CLA604
|
4.3
|
76.8
|
1.0
|
C2B
|
1:CLA604
|
4.3
|
76.8
|
1.0
|
C3B
|
1:CLA604
|
4.3
|
76.8
|
1.0
|
C2C
|
1:CLA604
|
4.3
|
76.8
|
1.0
|
C2D
|
1:CLA604
|
4.3
|
76.8
|
1.0
|
C3C
|
1:CLA604
|
4.4
|
76.8
|
1.0
|
C3A
|
1:CLA604
|
4.4
|
76.8
|
1.0
|
C2A
|
1:CLA604
|
4.5
|
76.8
|
1.0
|
C26
|
1:BCR619
|
4.6
|
77.8
|
1.0
|
CA
|
1:GLY101
|
4.6
|
70.3
|
1.0
|
O
|
1:GLY101
|
4.7
|
70.3
|
1.0
|
C38
|
1:BCR619
|
4.7
|
77.8
|
1.0
|
C29
|
1:BCR619
|
4.8
|
77.8
|
1.0
|
CBD
|
1:CLA604
|
4.9
|
76.8
|
1.0
|
|
Magnesium binding site 5 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 5 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg606
b:76.5
occ:1.00
|
MG
|
1:CLA606
|
0.0
|
76.5
|
1.0
|
NB
|
1:CLA606
|
2.0
|
76.5
|
1.0
|
ND
|
1:CLA606
|
2.0
|
76.5
|
1.0
|
NA
|
1:CLA606
|
2.1
|
76.5
|
1.0
|
NC
|
1:CLA606
|
2.1
|
76.5
|
1.0
|
C4D
|
1:CLA606
|
2.9
|
76.5
|
1.0
|
C1B
|
1:CLA606
|
3.0
|
76.5
|
1.0
|
C4A
|
1:CLA606
|
3.0
|
76.5
|
1.0
|
C4B
|
1:CLA606
|
3.0
|
76.5
|
1.0
|
C1C
|
1:CLA606
|
3.1
|
76.5
|
1.0
|
C1A
|
1:CLA606
|
3.1
|
76.5
|
1.0
|
C1D
|
1:CLA606
|
3.1
|
76.5
|
1.0
|
C4C
|
1:CLA606
|
3.2
|
76.5
|
1.0
|
CHB
|
1:CLA606
|
3.4
|
76.5
|
1.0
|
CHC
|
1:CLA606
|
3.4
|
76.5
|
1.0
|
CHA
|
1:CLA606
|
3.5
|
76.5
|
1.0
|
CHD
|
1:CLA606
|
3.5
|
76.5
|
1.0
|
C3D
|
1:CLA606
|
4.2
|
76.5
|
1.0
|
C2B
|
1:CLA606
|
4.3
|
76.5
|
1.0
|
C3B
|
1:CLA606
|
4.3
|
76.5
|
1.0
|
C2C
|
1:CLA606
|
4.3
|
76.5
|
1.0
|
C2D
|
1:CLA606
|
4.3
|
76.5
|
1.0
|
C3C
|
1:CLA606
|
4.4
|
76.5
|
1.0
|
C3A
|
1:CLA606
|
4.4
|
76.5
|
1.0
|
C2A
|
1:CLA606
|
4.5
|
76.5
|
1.0
|
C38
|
1:BCR619
|
4.5
|
77.8
|
1.0
|
OE1
|
1:GLU146
|
4.5
|
73.4
|
1.0
|
CD
|
1:GLU146
|
4.6
|
73.4
|
1.0
|
CBD
|
1:CLA606
|
4.9
|
76.5
|
1.0
|
OE2
|
1:GLU146
|
4.9
|
73.4
|
1.0
|
CG
|
1:GLU146
|
5.0
|
73.4
|
1.0
|
|
Magnesium binding site 6 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 6 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg607
b:72.2
occ:1.00
|
MG
|
1:CHL607
|
0.0
|
72.2
|
1.0
|
NA
|
1:CHL607
|
2.0
|
72.2
|
1.0
|
ND
|
1:CHL607
|
2.0
|
72.2
|
1.0
|
NB
|
1:CHL607
|
2.0
|
72.2
|
1.0
|
NC
|
1:CHL607
|
2.1
|
72.2
|
1.0
|
OE1
|
1:GLN117
|
2.2
|
76.1
|
1.0
|
C4D
|
1:CHL607
|
2.9
|
72.2
|
1.0
|
C4A
|
1:CHL607
|
3.0
|
72.2
|
1.0
|
C1A
|
1:CHL607
|
3.0
|
72.2
|
1.0
|
C1B
|
1:CHL607
|
3.0
|
72.2
|
1.0
|
C4B
|
1:CHL607
|
3.1
|
72.2
|
1.0
|
C1C
|
1:CHL607
|
3.1
|
72.2
|
1.0
|
C4C
|
1:CHL607
|
3.1
|
72.2
|
1.0
|
C1D
|
1:CHL607
|
3.1
|
72.2
|
1.0
|
CD
|
1:GLN117
|
3.2
|
76.1
|
1.0
|
CHB
|
1:CHL607
|
3.3
|
72.2
|
1.0
|
CHC
|
1:CHL607
|
3.4
|
72.2
|
1.0
|
CHA
|
1:CHL607
|
3.4
|
72.2
|
1.0
|
CHD
|
1:CHL607
|
3.5
|
72.2
|
1.0
|
NE2
|
1:GLN117
|
3.9
|
76.1
|
1.0
|
C3D
|
1:CHL607
|
4.2
|
72.2
|
1.0
|
CG
|
1:GLN117
|
4.2
|
76.1
|
1.0
|
C2A
|
1:CHL607
|
4.3
|
72.2
|
1.0
|
C3A
|
1:CHL607
|
4.3
|
72.2
|
1.0
|
C3B
|
1:CHL607
|
4.4
|
72.2
|
1.0
|
C2B
|
1:CHL607
|
4.4
|
72.2
|
1.0
|
C2C
|
1:CHL607
|
4.4
|
72.2
|
1.0
|
C2D
|
1:CHL607
|
4.4
|
72.2
|
1.0
|
C3C
|
1:CHL607
|
4.4
|
72.2
|
1.0
|
CB
|
1:GLN117
|
4.8
|
76.1
|
1.0
|
CBD
|
1:CHL607
|
4.9
|
72.2
|
1.0
|
CMC
|
1:CLA606
|
4.9
|
76.5
|
1.0
|
CAA
|
1:CHL607
|
5.0
|
72.2
|
1.0
|
|
Magnesium binding site 7 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 7 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg608
b:73.2
occ:1.00
|
MG
|
1:CLA608
|
0.0
|
73.2
|
1.0
|
NB
|
1:CLA608
|
2.0
|
73.2
|
1.0
|
ND
|
1:CLA608
|
2.0
|
73.2
|
1.0
|
NA
|
1:CLA608
|
2.1
|
73.2
|
1.0
|
NC
|
1:CLA608
|
2.1
|
73.2
|
1.0
|
C4D
|
1:CLA608
|
2.9
|
73.2
|
1.0
|
C1B
|
1:CLA608
|
3.0
|
73.2
|
1.0
|
C4A
|
1:CLA608
|
3.0
|
73.2
|
1.0
|
C4B
|
1:CLA608
|
3.0
|
73.2
|
1.0
|
C1C
|
1:CLA608
|
3.1
|
73.2
|
1.0
|
C4C
|
1:CLA608
|
3.1
|
73.2
|
1.0
|
C1D
|
1:CLA608
|
3.1
|
73.2
|
1.0
|
C1A
|
1:CLA608
|
3.2
|
73.2
|
1.0
|
CZ
|
1:PHE173
|
3.4
|
74.9
|
1.0
|
CHB
|
1:CLA608
|
3.4
|
73.2
|
1.0
|
CHC
|
1:CLA608
|
3.4
|
73.2
|
1.0
|
CHA
|
1:CLA608
|
3.5
|
73.2
|
1.0
|
CHD
|
1:CLA608
|
3.5
|
73.2
|
1.0
|
CE1
|
1:PHE173
|
3.5
|
74.9
|
1.0
|
C3D
|
1:CLA608
|
4.2
|
73.2
|
1.0
|
C2B
|
1:CLA608
|
4.2
|
73.2
|
1.0
|
C3B
|
1:CLA608
|
4.3
|
73.2
|
1.0
|
C2C
|
1:CLA608
|
4.3
|
73.2
|
1.0
|
C2D
|
1:CLA608
|
4.3
|
73.2
|
1.0
|
O
|
1:ALA153
|
4.4
|
70.5
|
1.0
|
C3C
|
1:CLA608
|
4.4
|
73.2
|
1.0
|
C3A
|
1:CLA608
|
4.4
|
73.2
|
1.0
|
C2A
|
1:CLA608
|
4.5
|
73.2
|
1.0
|
CE2
|
1:PHE173
|
4.5
|
74.9
|
1.0
|
CD1
|
1:PHE173
|
4.8
|
74.9
|
1.0
|
CB
|
1:ALA153
|
4.9
|
70.5
|
1.0
|
CBD
|
1:CLA608
|
4.9
|
73.2
|
1.0
|
C
|
1:ALA153
|
5.0
|
70.5
|
1.0
|
|
Magnesium binding site 8 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 8 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg609
b:66.7
occ:1.00
|
MG
|
1:CLA609
|
0.0
|
66.7
|
1.0
|
NB
|
1:CLA609
|
2.0
|
66.7
|
1.0
|
ND
|
1:CLA609
|
2.0
|
66.7
|
1.0
|
NA
|
1:CLA609
|
2.1
|
66.7
|
1.0
|
NC
|
1:CLA609
|
2.1
|
66.7
|
1.0
|
OE2
|
1:GLU154
|
2.2
|
67.8
|
1.0
|
CD
|
1:GLU154
|
2.9
|
67.8
|
1.0
|
C4D
|
1:CLA609
|
2.9
|
66.7
|
1.0
|
C1B
|
1:CLA609
|
3.0
|
66.7
|
1.0
|
C4A
|
1:CLA609
|
3.0
|
66.7
|
1.0
|
C4B
|
1:CLA609
|
3.1
|
66.7
|
1.0
|
C1C
|
1:CLA609
|
3.1
|
66.7
|
1.0
|
C4C
|
1:CLA609
|
3.1
|
66.7
|
1.0
|
C1A
|
1:CLA609
|
3.1
|
66.7
|
1.0
|
C1D
|
1:CLA609
|
3.1
|
66.7
|
1.0
|
CHB
|
1:CLA609
|
3.4
|
66.7
|
1.0
|
CHC
|
1:CLA609
|
3.4
|
66.7
|
1.0
|
CG
|
1:GLU154
|
3.4
|
67.8
|
1.0
|
CHA
|
1:CLA609
|
3.5
|
66.7
|
1.0
|
CHD
|
1:CLA609
|
3.5
|
66.7
|
1.0
|
OE1
|
1:GLU154
|
3.7
|
67.8
|
1.0
|
CMD
|
1:CLA603
|
3.8
|
61.7
|
1.0
|
C3D
|
1:CLA609
|
4.2
|
66.7
|
1.0
|
C2B
|
1:CLA609
|
4.3
|
66.7
|
1.0
|
C3B
|
1:CLA609
|
4.3
|
66.7
|
1.0
|
C2C
|
1:CLA609
|
4.3
|
66.7
|
1.0
|
C2D
|
1:CLA609
|
4.3
|
66.7
|
1.0
|
C3C
|
1:CLA609
|
4.4
|
66.7
|
1.0
|
C3A
|
1:CLA609
|
4.4
|
66.7
|
1.0
|
C2A
|
1:CLA609
|
4.4
|
66.7
|
1.0
|
CB
|
1:GLU154
|
4.7
|
67.8
|
1.0
|
NH2
|
1:ARG157
|
4.7
|
70.8
|
1.0
|
C2D
|
1:CLA603
|
4.8
|
61.7
|
1.0
|
CBD
|
1:CLA609
|
4.9
|
66.7
|
1.0
|
OBD
|
1:CLA603
|
5.0
|
61.7
|
1.0
|
|
Magnesium binding site 9 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 9 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg610
b:71.6
occ:1.00
|
MG
|
1:CLA610
|
0.0
|
71.6
|
1.0
|
NB
|
1:CLA610
|
2.0
|
71.6
|
1.0
|
ND
|
1:CLA610
|
2.0
|
71.6
|
1.0
|
NA
|
1:CLA610
|
2.1
|
71.6
|
1.0
|
NC
|
1:CLA610
|
2.1
|
71.6
|
1.0
|
OE2
|
1:GLU192
|
2.3
|
71.2
|
1.0
|
C4D
|
1:CLA610
|
2.9
|
71.6
|
1.0
|
C1B
|
1:CLA610
|
3.0
|
71.6
|
1.0
|
C4A
|
1:CLA610
|
3.0
|
71.6
|
1.0
|
C4B
|
1:CLA610
|
3.1
|
71.6
|
1.0
|
C1C
|
1:CLA610
|
3.1
|
71.6
|
1.0
|
CD
|
1:GLU192
|
3.1
|
71.2
|
1.0
|
C4C
|
1:CLA610
|
3.1
|
71.6
|
1.0
|
C1D
|
1:CLA610
|
3.1
|
71.6
|
1.0
|
C1A
|
1:CLA610
|
3.1
|
71.6
|
1.0
|
CHB
|
1:CLA610
|
3.4
|
71.6
|
1.0
|
CHC
|
1:CLA610
|
3.4
|
71.6
|
1.0
|
CHA
|
1:CLA610
|
3.5
|
71.6
|
1.0
|
CHD
|
1:CLA610
|
3.5
|
71.6
|
1.0
|
OE1
|
1:GLU192
|
3.5
|
71.2
|
1.0
|
C38
|
1:LUT617
|
4.0
|
70.5
|
1.0
|
NE
|
1:ARG93
|
4.2
|
68.7
|
1.0
|
CG
|
1:GLU192
|
4.2
|
71.2
|
1.0
|
C3D
|
1:CLA610
|
4.2
|
71.6
|
1.0
|
C2B
|
1:CLA610
|
4.3
|
71.6
|
1.0
|
C3B
|
1:CLA610
|
4.3
|
71.6
|
1.0
|
C2C
|
1:CLA610
|
4.3
|
71.6
|
1.0
|
C2D
|
1:CLA610
|
4.3
|
71.6
|
1.0
|
C3C
|
1:CLA610
|
4.3
|
71.6
|
1.0
|
C3A
|
1:CLA610
|
4.4
|
71.6
|
1.0
|
NH2
|
1:ARG93
|
4.4
|
68.7
|
1.0
|
C2A
|
1:CLA610
|
4.4
|
71.6
|
1.0
|
CZ
|
1:ARG93
|
4.6
|
68.7
|
1.0
|
C25
|
1:LUT617
|
4.6
|
70.5
|
1.0
|
C28
|
1:LUT617
|
4.9
|
70.5
|
1.0
|
CBD
|
1:CLA610
|
4.9
|
71.6
|
1.0
|
CBA
|
1:CLA610
|
4.9
|
71.6
|
1.0
|
O2A
|
1:CLA610
|
4.9
|
71.6
|
1.0
|
CD
|
1:ARG93
|
5.0
|
68.7
|
1.0
|
C26
|
1:LUT617
|
5.0
|
70.5
|
1.0
|
|
Magnesium binding site 10 out
of 202 in 5zji
Go back to
Magnesium Binding Sites List in 5zji
Magnesium binding site 10 out
of 202 in the Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Structure of Photosystem I Supercomplex with Light-Harvesting Complexes I and II within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg611
b:66.8
occ:1.00
|
MG
|
1:CLA611
|
0.0
|
66.8
|
1.0
|
NB
|
1:CLA611
|
2.0
|
66.8
|
1.0
|
ND
|
1:CLA611
|
2.0
|
66.8
|
1.0
|
NC
|
1:CLA611
|
2.1
|
66.8
|
1.0
|
NA
|
1:CLA611
|
2.1
|
66.8
|
1.0
|
O4
|
1:LHG620
|
2.2
|
65.7
|
1.0
|
C4D
|
1:CLA611
|
2.9
|
66.8
|
1.0
|
C1B
|
1:CLA611
|
3.0
|
66.8
|
1.0
|
C4A
|
1:CLA611
|
3.0
|
66.8
|
1.0
|
C4B
|
1:CLA611
|
3.1
|
66.8
|
1.0
|
C1C
|
1:CLA611
|
3.1
|
66.8
|
1.0
|
C1D
|
1:CLA611
|
3.1
|
66.8
|
1.0
|
C4C
|
1:CLA611
|
3.1
|
66.8
|
1.0
|
C1A
|
1:CLA611
|
3.2
|
66.8
|
1.0
|
CHB
|
1:CLA611
|
3.4
|
66.8
|
1.0
|
P
|
1:LHG620
|
3.4
|
65.7
|
1.0
|
CHC
|
1:CLA611
|
3.4
|
66.8
|
1.0
|
O6
|
1:LHG620
|
3.5
|
65.7
|
1.0
|
CHA
|
1:CLA611
|
3.5
|
66.8
|
1.0
|
CHD
|
1:CLA611
|
3.5
|
66.8
|
1.0
|
CMD
|
1:CLA612
|
4.1
|
70.0
|
1.0
|
C3D
|
1:CLA611
|
4.2
|
66.8
|
1.0
|
O3
|
1:LHG620
|
4.3
|
65.7
|
1.0
|
C2B
|
1:CLA611
|
4.3
|
66.8
|
1.0
|
C3B
|
1:CLA611
|
4.3
|
66.8
|
1.0
|
C2C
|
1:CLA611
|
4.3
|
66.8
|
1.0
|
C2D
|
1:CLA611
|
4.3
|
66.8
|
1.0
|
C3C
|
1:CLA611
|
4.4
|
66.8
|
1.0
|
C3A
|
1:CLA611
|
4.4
|
66.8
|
1.0
|
C2A
|
1:CLA611
|
4.5
|
66.8
|
1.0
|
O5
|
1:LHG620
|
4.7
|
65.7
|
1.0
|
C4
|
1:LHG620
|
4.8
|
65.7
|
1.0
|
CBD
|
1:CLA611
|
4.9
|
66.8
|
1.0
|
|
Reference:
X.Pan,
J.Ma,
X.Su,
P.Cao,
W.Chang,
Z.Liu,
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Structure of the Maize Photosystem I Supercomplex with Light-Harvesting Complexes I and II. Science V. 360 1109 2018.
ISSN: ESSN 1095-9203
PubMed: 29880686
DOI: 10.1126/SCIENCE.AAT1156
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