Magnesium in PDB 6a3a: Mvm Nes Mutant NM2 in Complex with CRM1-Ran-RANBP1

Protein crystallography data

The structure of Mvm Nes Mutant NM2 in Complex with CRM1-Ran-RANBP1, PDB code: 6a3a was solved by Q.Sun, Y.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.99 / 2.30
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 106.650, 106.650, 304.310, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 24.6

Other elements in 6a3a:

The structure of Mvm Nes Mutant NM2 in Complex with CRM1-Ran-RANBP1 also contains other interesting chemical elements:

Sodium (Na) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Mvm Nes Mutant NM2 in Complex with CRM1-Ran-RANBP1 (pdb code 6a3a). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Mvm Nes Mutant NM2 in Complex with CRM1-Ran-RANBP1, PDB code: 6a3a:

Magnesium binding site 1 out of 1 in 6a3a

Go back to Magnesium Binding Sites List in 6a3a
Magnesium binding site 1 out of 1 in the Mvm Nes Mutant NM2 in Complex with CRM1-Ran-RANBP1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mvm Nes Mutant NM2 in Complex with CRM1-Ran-RANBP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:69.7
occ:1.00
O2G A:GTP301 1.8 63.6 1.0
OG1 A:THR24 2.1 65.0 1.0
OG1 A:THR42 2.1 69.9 1.0
O A:HOH416 2.1 56.7 1.0
O A:HOH413 2.1 47.3 1.0
O1B A:GTP301 2.3 59.0 1.0
CB A:THR42 3.1 70.4 1.0
CB A:THR24 3.1 63.7 1.0
PG A:GTP301 3.2 64.9 1.0
PB A:GTP301 3.5 57.1 1.0
N A:THR42 3.5 70.4 1.0
O3B A:GTP301 3.6 60.7 1.0
CA A:THR42 3.8 71.8 1.0
OD2 A:ASP65 3.9 66.1 1.0
O3G A:GTP301 4.0 64.1 1.0
O A:HOH410 4.0 59.5 1.0
CG2 A:THR24 4.0 65.6 1.0
N A:THR24 4.1 60.2 1.0
CA A:THR24 4.1 61.2 1.0
CG2 A:THR42 4.3 71.6 1.0
O1A A:GTP301 4.3 63.2 1.0
O1G A:GTP301 4.3 62.9 1.0
O A:VAL40 4.4 71.0 1.0
O2B A:GTP301 4.5 61.8 1.0
OD1 A:ASP65 4.5 65.4 1.0
C A:ALA41 4.5 72.0 1.0
O3A A:GTP301 4.5 58.5 1.0
CG A:ASP65 4.6 65.0 1.0
O A:THR66 4.7 60.2 1.0
PA A:GTP301 4.7 59.5 1.0
O2A A:GTP301 4.7 62.5 1.0
O A:HOH409 4.8 52.8 1.0
CA A:ALA41 4.9 71.3 1.0

Reference:

Q.Sun, Y.Li. MM2 in Complex with CRM1-Ran-RANBP1 To Be Published.
Page generated: Mon Dec 14 22:18:57 2020

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