Atomistry » Magnesium » PDB 6a1m-6aad » 6a3b
Atomistry »
  Magnesium »
    PDB 6a1m-6aad »
      6a3b »

Magnesium in PDB 6a3b: Mvm Nes Mutant NM13 in Complex with CRM1-Ran-RANBP1

Protein crystallography data

The structure of Mvm Nes Mutant NM13 in Complex with CRM1-Ran-RANBP1, PDB code: 6a3b was solved by Q.Sun, Y.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.01 / 2.51
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 106.362, 106.362, 303.858, 90.00, 90.00, 90.00
R / Rfree (%) 21.3 / 25.4

Other elements in 6a3b:

The structure of Mvm Nes Mutant NM13 in Complex with CRM1-Ran-RANBP1 also contains other interesting chemical elements:

Sodium (Na) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Mvm Nes Mutant NM13 in Complex with CRM1-Ran-RANBP1 (pdb code 6a3b). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Mvm Nes Mutant NM13 in Complex with CRM1-Ran-RANBP1, PDB code: 6a3b:

Magnesium binding site 1 out of 1 in 6a3b

Go back to Magnesium Binding Sites List in 6a3b
Magnesium binding site 1 out of 1 in the Mvm Nes Mutant NM13 in Complex with CRM1-Ran-RANBP1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mvm Nes Mutant NM13 in Complex with CRM1-Ran-RANBP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:58.6
occ:1.00
O2G A:GTP301 1.8 62.1 1.0
OG1 A:THR24 1.9 60.2 1.0
OG1 A:THR42 1.9 59.4 1.0
O2B A:GTP301 1.9 60.2 1.0
O A:HOH403 2.0 51.4 1.0
O A:HOH401 2.0 44.2 1.0
CB A:THR24 3.0 60.0 1.0
CB A:THR42 3.1 61.2 1.0
PB A:GTP301 3.2 59.1 1.0
PG A:GTP301 3.2 63.5 1.0
O3B A:GTP301 3.5 62.1 1.0
N A:THR42 3.7 61.9 1.0
OD2 A:ASP65 3.8 62.0 1.0
O A:HOH406 3.9 51.0 1.0
CA A:THR42 3.9 63.0 1.0
N A:THR24 4.0 55.1 1.0
CG2 A:THR24 4.0 61.8 1.0
CA A:THR24 4.0 56.9 1.0
OD1 A:ASP65 4.1 61.2 1.0
O3G A:GTP301 4.1 64.1 1.0
O2A A:GTP301 4.2 61.0 1.0
CG2 A:THR42 4.2 62.5 1.0
O1B A:GTP301 4.2 60.4 1.0
O1G A:GTP301 4.2 63.8 1.0
O3A A:GTP301 4.3 60.0 1.0
CG A:ASP65 4.3 61.2 1.0
O1A A:GTP301 4.3 59.8 1.0
PA A:GTP301 4.4 59.6 1.0
O A:VAL40 4.6 63.5 1.0
O A:THR66 4.7 58.4 1.0
C A:ALA41 4.8 62.8 1.0

Reference:

Q.Sun, Y.Li. MM12 in Complex with CRM1-Ran-RANBP1 To Be Published.
Page generated: Mon Sep 30 18:56:34 2024

Last articles

Ca in 5S5K
Ca in 5S5J
Ca in 5S5I
Ca in 5S5H
Ca in 5S5G
Ca in 5S5F
Ca in 5S5D
Ca in 5S5E
Ca in 5S5C
Ca in 5S5B
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy