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Magnesium in PDB 6atg: Insights to Complement Factor H Recruitment By the Borrelial Cspz Protein As Revealed By Structural Analysis

Protein crystallography data

The structure of Insights to Complement Factor H Recruitment By the Borrelial Cspz Protein As Revealed By Structural Analysis, PDB code: 6atg was solved by A.Liu, H.Yan, Y.Wu, Y.Li, J.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.50 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 43.742, 53.772, 116.587, 90.00, 92.99, 90.00
R / Rfree (%) 17.8 / 20.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Insights to Complement Factor H Recruitment By the Borrelial Cspz Protein As Revealed By Structural Analysis (pdb code 6atg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Insights to Complement Factor H Recruitment By the Borrelial Cspz Protein As Revealed By Structural Analysis, PDB code: 6atg:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6atg

Go back to Magnesium Binding Sites List in 6atg
Magnesium binding site 1 out of 2 in the Insights to Complement Factor H Recruitment By the Borrelial Cspz Protein As Revealed By Structural Analysis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Insights to Complement Factor H Recruitment By the Borrelial Cspz Protein As Revealed By Structural Analysis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg301

b:16.2
occ:0.81
O B:HOH538 1.9 18.4 1.0
OE1 B:GLN119 2.1 23.3 1.0
OD1 B:ASN127 2.1 17.6 1.0
O B:HOH515 2.2 22.4 1.0
OE1 B:GLU116 2.2 18.6 1.0
ND1 B:HIS130 2.4 22.1 1.0
CG B:ASN127 3.1 14.4 1.0
CD B:GLN119 3.2 21.9 1.0
CD B:GLU116 3.2 20.9 1.0
CE1 B:HIS130 3.3 25.6 1.0
CG B:HIS130 3.4 18.8 1.0
ND2 B:ASN127 3.4 15.9 1.0
OE2 B:GLU116 3.5 20.4 1.0
CB B:HIS130 3.7 14.0 1.0
NE2 B:GLN119 3.7 22.9 1.0
CB B:ASN127 4.4 16.7 1.0
NE2 B:HIS130 4.4 22.1 1.0
CD2 B:HIS130 4.5 17.9 1.0
CG B:GLN119 4.5 20.8 1.0
O B:HOH654 4.5 45.5 1.0
CG B:GLU116 4.6 18.4 1.0
CB B:GLN119 4.7 20.3 1.0
CB B:GLU116 4.9 15.2 1.0

Magnesium binding site 2 out of 2 in 6atg

Go back to Magnesium Binding Sites List in 6atg
Magnesium binding site 2 out of 2 in the Insights to Complement Factor H Recruitment By the Borrelial Cspz Protein As Revealed By Structural Analysis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Insights to Complement Factor H Recruitment By the Borrelial Cspz Protein As Revealed By Structural Analysis within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg301

b:31.9
occ:0.74
O C:HOH407 2.0 34.0 1.0
O C:HOH555 2.1 28.8 1.0
O C:HOH420 2.3 39.4 1.0
OE1 C:GLN119 2.6 31.2 1.0
OE1 C:GLU116 2.7 23.4 1.0
OE2 C:GLU116 3.0 34.6 1.0
CD C:GLU116 3.2 28.9 1.0
CD C:GLN119 3.6 30.7 1.0
NE2 C:GLN119 3.9 33.0 1.0
ND1 C:HIS130 4.1 38.0 1.0
OD1 C:ASN127 4.4 23.5 1.0
O C:HOH536 4.5 23.1 1.0
CG C:GLU116 4.6 26.8 1.0
ND2 C:ASN127 4.7 21.1 1.0
CE1 C:HIS130 4.7 41.4 1.0
CG C:HIS130 4.9 27.2 1.0
CG C:GLN119 4.9 26.8 1.0
CG C:ASN127 5.0 20.0 1.0

Reference:

A.Liu, H.Yan, Y.Wu, Y.Li, J.Liu. Insights to Complement Factor H Recruitment By the Borrelial Cspz Protein As Revealed By Structural Analysis To Be Published.
Page generated: Mon Sep 30 19:22:06 2024

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