Magnesium in PDB 6axe: Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa

All present enzymatic activity of Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa:
2.3.3.9;

The structure of Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa, PDB code: 6axe was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.73 / 1.60
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	78.600, 86.980, 124.130, 90.00, 98.45, 90.00
R / Rfree (%)	15.2 / 17.4

The binding sites of Magnesium atom in the Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa (pdb code 6axe). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa, PDB code: 6axe:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg802 b:29.9 occ:1.00 O A:HOH1088 2.2 26.4 1.0 OD2 A:ASP466 2.2 22.6 1.0 O A:HOH1571 2.3 18.4 0.5 O A:HOH1543 2.3 46.3 1.0 OE2 A:GLU438 2.3 20.4 1.0 CD A:GLU438 3.1 19.2 1.0 CG A:ASP466 3.2 22.5 1.0 OE1 A:GLU438 3.4 18.1 1.0 CB A:ASP466 3.5 16.2 1.0 O A:HOH1571 3.7 18.1 0.5 OD2 A:ASP274 3.8 31.9 1.0 NH1 A:ARG339 4.0 19.6 1.0 O A:ACO801 4.0 58.4 1.0 NZ A:LYS403 4.1 19.6 1.0 CB A:ALA639 4.2 18.2 1.0 OD1 A:ASP466 4.3 18.6 1.0 CG A:GLU438 4.4 16.0 1.0 CH3 A:ACO801 4.4 62.7 1.0 N A:ASP466 4.6 18.5 1.0 C A:ACO801 4.6 60.1 1.0 OE1 A:GLU273 4.6 21.6 1.0 CA A:ASP466 4.7 18.1 1.0 CG A:ASP274 4.7 25.7 1.0 CB A:GLU438 4.7 16.4 1.0 CE A:MET436 4.9 18.7 1.0 CA A:GLY463 5.0 16.7 1.0 CZ A:ARG339 5.0 18.1 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg803 b:30.4 occ:1.00 O B:HOH910 2.0 36.1 1.0 O B:HOH1141 2.2 25.5 1.0 OD2 B:ASP466 2.3 25.5 1.0 OE2 B:GLU438 2.4 27.1 1.0 O B:HOH1239 2.6 42.1 1.0 O B:HOH1503 3.0 49.9 1.0 CD B:GLU438 3.2 24.6 1.0 CG B:ASP466 3.3 22.3 1.0 OE1 B:GLU438 3.5 20.1 1.0 CB B:ASP466 3.7 21.8 1.0 CE B:MET436 3.8 18.9 0.4 OD2 B:ASP274 3.9 26.1 1.0 NH1 B:ARG339 4.1 23.0 1.0 NZ B:LYS403 4.1 23.0 1.0 OD1 B:ASP466 4.4 23.1 1.0 CB B:ALA639 4.5 23.7 1.0 CG B:GLU438 4.5 18.8 1.0 SD B:MET436 4.5 22.2 0.4 OE1 B:GLU273 4.6 21.6 1.0 O B:HOH960 4.6 33.2 1.0 CG B:ASP274 4.7 29.1 1.0 N B:ASP466 4.8 30.2 1.0 CB B:GLU438 4.8 17.4 1.0 CA B:ASP466 4.8 25.4 1.0 CA B:GLY463 5.0 28.5 0.8 CE B:MET436 5.0 18.5 0.6 CZ B:ARG339 5.0 21.6 1.0

T.E.Edwards, D.M.Dranow, D.D.Lorimer, Seattle Structural Genomics Center For Infectious Disease. Crystal Structure of A Malate Synthase G From Mycobacterium Marinum Bound to Acetyl Coa To Be Published.