Magnesium in PDB 6bc0: A Complex Between pH Domain of P190RHOGEF and Activated Rhoa Bound to A Gtp Analog

Protein crystallography data

The structure of A Complex Between pH Domain of P190RHOGEF and Activated Rhoa Bound to A Gtp Analog, PDB code: 6bc0 was solved by Z.Chen, P.C.Sternweis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.61 / 2.20
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 73.160, 73.160, 266.270, 90.00, 90.00, 120.00
R / Rfree (%) 22.3 / 28.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the A Complex Between pH Domain of P190RHOGEF and Activated Rhoa Bound to A Gtp Analog (pdb code 6bc0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the A Complex Between pH Domain of P190RHOGEF and Activated Rhoa Bound to A Gtp Analog, PDB code: 6bc0:

Magnesium binding site 1 out of 1 in 6bc0

Go back to Magnesium Binding Sites List in 6bc0
Magnesium binding site 1 out of 1 in the A Complex Between pH Domain of P190RHOGEF and Activated Rhoa Bound to A Gtp Analog


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of A Complex Between pH Domain of P190RHOGEF and Activated Rhoa Bound to A Gtp Analog within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg201

b:82.0
occ:1.00
HOG2 F:GSP202 1.5 74.5 1.0
HG1 F:THR37 1.5 88.1 1.0
O2B F:GSP202 1.9 73.0 1.0
O F:HOH310 1.9 58.4 1.0
OG1 F:THR19 1.9 76.5 1.0
OG1 F:THR37 2.0 73.4 1.0
O F:HOH313 2.3 70.5 1.0
O2G F:GSP202 2.3 62.1 1.0
HB F:THR19 2.9 85.3 1.0
CB F:THR19 3.0 71.1 1.0
PB F:GSP202 3.1 78.6 1.0
CB F:THR37 3.2 79.6 1.0
HB F:THR37 3.2 95.5 1.0
H F:THR19 3.3 88.3 1.0
PG F:GSP202 3.4 78.7 1.0
O3B F:GSP202 3.5 60.2 1.0
H F:THR37 3.7 99.2 1.0
N F:THR19 3.9 73.6 1.0
HG21 F:THR37 3.9 94.8 1.0
HG21 F:THR19 3.9 94.3 1.0
CA F:THR19 4.0 71.4 1.0
OD1 F:ASP59 4.0 67.7 1.0
OD2 F:ASP59 4.0 73.5 1.0
CG2 F:THR19 4.0 78.6 1.0
CG2 F:THR37 4.1 79.0 1.0
HB2 F:LYS18 4.1 72.7 1.0
N F:THR37 4.1 82.7 1.0
O3G F:GSP202 4.1 65.8 1.0
O2A F:GSP202 4.2 73.1 1.0
O3A F:GSP202 4.2 61.4 1.0
O1B F:GSP202 4.2 64.8 1.0
CA F:THR37 4.2 65.9 1.0
HA F:THR19 4.3 85.7 1.0
HE2 F:LYS18 4.4 77.3 1.0
CG F:ASP59 4.4 68.3 1.0
HG23 F:THR37 4.4 94.8 1.0
HG23 F:THR19 4.4 94.3 1.0
HOG3 F:GSP202 4.5 79.0 1.0
PA F:GSP202 4.5 79.5 1.0
O F:THR60 4.5 58.5 1.0
HA F:PRO36 4.6 0.5 1.0
O F:VAL35 4.6 81.4 1.0
HE1 F:TYR34 4.7 0.8 1.0
HA F:THR37 4.7 79.1 1.0
O1A F:GSP202 4.7 80.3 1.0
HZ1 F:LYS18 4.7 88.0 1.0
HG22 F:THR19 4.8 94.3 1.0
S1G F:GSP202 4.9 92.2 1.0
HZ3 F:LYS18 4.9 88.0 1.0
HG22 F:THR37 4.9 94.8 1.0
C F:PRO36 5.0 89.0 1.0
C F:LYS18 5.0 70.7 1.0
CB F:LYS18 5.0 60.5 1.0

Reference:

O.Dada, S.Gutowski, C.A.Brautigam, Z.Chen, P.C.Sternweis. Direct Regulation of P190RHOGEF By Activated Rho and Rac Gtpases. J. Struct. Biol. V. 202 13 2018.
ISSN: ESSN 1095-8657
PubMed: 29196061
DOI: 10.1016/J.JSB.2017.11.014
Page generated: Mon Dec 14 22:23:19 2020

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