Magnesium in PDB 6bie: Misreading Chaperone-Substrate Complexes From Random Noise

Protein crystallography data

The structure of Misreading Chaperone-Substrate Complexes From Random Noise, PDB code: 6bie was solved by J.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 64.54 / 1.77
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 42.960, 42.960, 258.169, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 24.8

Other elements in 6bie:

The structure of Misreading Chaperone-Substrate Complexes From Random Noise also contains other interesting chemical elements:

Zinc (Zn) 14 atoms
Chlorine (Cl) 7 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Misreading Chaperone-Substrate Complexes From Random Noise (pdb code 6bie). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Misreading Chaperone-Substrate Complexes From Random Noise, PDB code: 6bie:

Magnesium binding site 1 out of 1 in 6bie

Go back to Magnesium Binding Sites List in 6bie
Magnesium binding site 1 out of 1 in the Misreading Chaperone-Substrate Complexes From Random Noise


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Misreading Chaperone-Substrate Complexes From Random Noise within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg205

b:77.5
occ:1.00
O B:HOH315 2.2 77.3 1.0
O B:HOH318 2.2 79.5 1.0
O B:HOH325 2.2 76.6 1.0
O B:HOH354 2.2 77.2 1.0
O B:HOH387 2.2 78.0 1.0
OE2 B:GLU98 2.4 58.8 1.0
HZ2 B:LYS102 3.1 64.4 1.0
HE21 B:GLN52 3.2 1.0 0.0
CD B:GLU98 3.3 45.4 1.0
OE1 B:GLU98 3.4 49.6 1.0
O B:HOH384 3.6 74.9 1.0
NZ B:LYS102 4.0 64.4 1.0
NE2 B:GLN52 4.0 1.0 1.0
HE3 B:LYS102 4.3 58.4 1.0
OE1 B:GLN52 4.3 0.5 1.0
HE2 B:LYS102 4.3 58.4 1.0
CE B:LYS102 4.5 58.4 1.0
HZ1 B:LYS102 4.5 64.4 1.0
HZ3 B:LYS102 4.6 64.4 1.0
CG B:GLU98 4.6 41.5 1.0
CD B:GLN52 4.6 0.1 1.0
HG2 B:GLU98 4.6 41.5 1.0
O B:HOH329 4.6 78.2 1.0
HE22 B:GLN52 4.7 1.0 0.0
O B:HOH382 4.9 67.0 1.0
HG3 B:GLU98 5.0 41.5 1.0

Reference:

J.Wang, J.Wang. N/A N/A.
ISSN: ESSN 1545-9985
PubMed: 30297779
DOI: 10.1038/S41594-018-0144-3
Page generated: Mon Dec 14 22:23:41 2020

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