Magnesium in PDB 6bs4: Crystal Structure of Atpgammas-Bound Bacterial GET3-Like A and B in Mycobacterium Tuberculosis

The structure of Crystal Structure of Atpgammas-Bound Bacterial GET3-Like A and B in Mycobacterium Tuberculosis, PDB code: 6bs4 was solved by H.Li, K.Hu, A.Kovach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.23 / 2.50
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	121.629, 121.629, 120.058, 90.00, 90.00, 120.00
R / Rfree (%)	19.1 / 22.7

The binding sites of Magnesium atom in the Crystal Structure of Atpgammas-Bound Bacterial GET3-Like A and B in Mycobacterium Tuberculosis (pdb code 6bs4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Atpgammas-Bound Bacterial GET3-Like A and B in Mycobacterium Tuberculosis, PDB code: 6bs4:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Atpgammas-Bound Bacterial GET3-Like A and B in Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Atpgammas-Bound Bacterial GET3-Like A and B in Mycobacterium Tuberculosis within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:21.9 occ:1.00 O A:HOH565 2.0 35.3 1.0 O3G A:AGS401 2.1 35.7 1.0 O A:HOH545 2.1 25.5 1.0 O A:HOH532 2.1 30.3 1.0 O2B A:AGS401 2.2 35.3 1.0 OG A:SER35 2.2 32.0 1.0 PG A:AGS401 3.4 40.3 1.0 CB A:SER35 3.4 30.9 1.0 PB A:AGS401 3.4 35.6 1.0 O3B A:AGS401 3.5 37.6 1.0 O A:HOH585 4.0 50.0 1.0 NH1 A:ARG60 4.0 33.5 1.0 N A:SER35 4.1 29.4 1.0 O A:HOH505 4.1 39.2 1.0 O2A A:AGS401 4.2 37.1 1.0 NH2 A:ARG60 4.2 40.0 1.0 OD1 A:ASP162 4.2 41.8 1.0 O2G A:AGS401 4.3 37.1 1.0 OD2 A:ASP162 4.3 44.3 1.0 CA A:SER35 4.3 29.1 1.0 CZ A:ARG60 4.4 45.1 1.0 O3A A:AGS401 4.4 34.3 1.0 O1B A:AGS401 4.5 33.4 1.0 O A:HOH506 4.6 39.6 1.0 O A:HOH518 4.7 44.8 1.0 CG A:ASP162 4.7 38.5 1.0 S1G A:AGS401 4.7 44.9 1.0 O A:HOH528 4.7 31.8 1.0 PA A:AGS401 4.8 34.8 1.0 CB A:LYS34 4.9 30.0 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Atpgammas-Bound Bacterial GET3-Like A and B in Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Atpgammas-Bound Bacterial GET3-Like A and B in Mycobacterium Tuberculosis within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:33.6 occ:1.00 O B:HOH506 2.0 37.4 1.0 O3B B:ADP401 2.0 32.6 1.0 O B:HOH516 2.1 26.4 1.0 OD1 B:ASP56 2.2 41.7 1.0 OG1 B:THR33 2.2 31.7 1.0 O B:HOH522 2.4 29.6 1.0 CG B:ASP56 3.1 43.1 1.0 PB B:ADP401 3.3 33.2 1.0 CB B:THR33 3.4 31.2 1.0 OD2 B:ASP56 3.4 50.3 1.0 O2B B:ADP401 3.5 32.7 1.0 N B:THR33 4.0 28.2 1.0 OD2 B:ASP154 4.1 33.9 1.0 O B:ASP56 4.2 34.3 1.0 OD1 B:ASP154 4.2 35.6 1.0 CA B:THR33 4.2 28.6 1.0 O3A B:ADP401 4.3 32.8 1.0 O1B B:ADP401 4.3 32.1 1.0 O2A B:ADP401 4.4 29.9 1.0 CG2 B:THR33 4.4 25.5 1.0 CB B:ASP56 4.4 32.5 1.0 CG B:ASP154 4.6 34.3 1.0 N B:ASP56 4.6 33.7 1.0 C B:ASP56 4.7 36.2 1.0 O B:THR155 4.7 35.9 1.0 PA B:ADP401 4.7 31.2 1.0 CA B:ASP56 4.8 32.4 1.0 CD B:PRO157 4.8 38.3 1.0 CB B:LYS32 4.9 28.3 1.0 O1A B:ADP401 4.9 32.1 1.0

K.Hu, A.T.Jordan, S.Zhang, A.Dhabaria, A.Kovach, M.V.Rangel, B.Ueberheide, H.Li, K.H.Darwin. Characterization of Guided Entry of Tail-Anchored Proteins 3 Homologues in Mycobacterium Tuberculosis. J.Bacteriol. V. 201 2019.
ISSN: ESSN 1098-5530
PubMed: 31036728
DOI: 10.1128/JB.00159-19